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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053533 through 18771 annotations produced 1 hits



lectin-37Da /// lectin-37Db (lectin-37Da /// lectin-37Db):

Annotation Number : CG9978
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053532 /// FBgn0053533
Gbrowse : chr2L:19418312-19419680 (+) // 100.0 //
Probeset : 1625671_at
Accessions : protein= NP_001014489; /// NP_001014490;, nucleotide= NM_001014489; /// NM_001014490;
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005529 // sugar binding // inferred from electronic annot
FlyMine data for FBgn0053532 /// FBgn0053533.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head6 ± 20 of 4 0.00Down
Eye5 ± 11 of 4 0.01Down
Thoracicoabdominal ganglion1 ± 10 of 4 0.00Down
Salivary gland7 ± 30 of 4 0.02Down
Crop2 ± 10 of 4 0.00Down
Midgut3827 ± 994 of 4 9.90Up
Tubule68 ± 153 of 4 0.20Down
Hindgut834 ± 584 of 4 2.20Up
Heart5 ± 01 of 4 0.01Down
Fat body7 ± 30 of 4 0.02Down
Ovary1 ± 10 of 4 0.00Down
Testis1 ± 10 of 4 0.00Down
Male accessory glands3 ± 10 of 4 0.00Down
Virgin spermatheca395 ± 194 of 4 1.03None
Mated spermatheca492 ± 1444 of 4 1.28None
Adult carcass9 ± 30 of 4 0.00Down
Larval CNS2 ± 10 of 4 0.01Down
Larval Salivary gland4 ± 30 of 4 0.01Down
Larval midgut42 ± 24 of 4 0.11Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut12 ± 12 of 4 0.03Down
Larval fat body2 ± 00 of 4 0.00Down
Larval trachea1 ± 00 of 4 0.00Down
Larval carcass8 ± 01 of 4 0.02Down
S2 cells (growing)1 ± 00 of 4 0.00Down
Whole fly385 ± 444 of 4

Looking for FBgn0053533. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime