FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053543 through 18771 annotations produced 2 hits

(CG33543):

Annotation Number : CG15354
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053543
Gbrowse : chr2L:2000245-2002960 (-) // 100.0 //
Probeset : 1623163_at
Accessions : protein= NP_001014458;, nucleotide= NM_001014458;
Pathway : 0016020 // membrane // inferred from sequence or structural similarity
FlyMine data for FBgn0053543.
VDRC has 5 RNAi stocks for FBgn0053543 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 0	1 of 4	1.50	None
Head	4 ± 1	0 of 4	1.50	None
Eye	2 ± 0	0 of 4	0.98	None
Thoracicoabdominal ganglion	3 ± 1	1 of 4	1.10	None
Salivary gland	9 ± 0	0 of 4	3.27	Up
Crop	3 ± 2	0 of 4	1.30	None
Midgut	5 ± 3	0 of 4	1.90	None
Tubule	3 ± 0	0 of 4	1.40	Up
Hindgut	5 ± 0	0 of 4	2.00	None
Heart	0 ± 0	0 of 4	0.18	None
Fat body	4 ± 2	0 of 4	1.72	None
Ovary	2 ± 0	1 of 4	1.00	None
Testis	3 ± 1	0 of 4	1.40	None
Male accessory glands	3 ± 1	0 of 4	1.30	None
Virgin spermatheca	1 ± 0	0 of 4	0.46	None
Mated spermatheca	2 ± 0	0 of 4	0.92	None
Adult carcass	5 ± 1	0 of 4	1.90	None
Larval CNS	3 ± 1	1 of 4	1.38	None
Larval Salivary gland	1 ± 0	0 of 4	0.44	None
Larval midgut	5 ± 1	0 of 4	2.07	None
Larval tubule	3 ± 1	0 of 4	1.20	None
Larval hindgut	3 ± 0	0 of 4	1.10	None
Larval fat body	2 ± 0	0 of 4	0.90	None
Larval trachea	1 ± 1	0 of 4	0.59	None
Larval carcass	7 ± 0	1 of 4	2.52	Up
S2 cells (growing)	3 ± 1	1 of 4	1.27	None
Whole fly	2 ± 1	0 of 4

(CG33543):

Annotation Number : CG15355
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053543
Gbrowse : chr2L:1997773-1998934 (-) // 100.0 //
Probeset : 1638097_at
Accessions : protein= NP_001014458;, nucleotide= NM_001014458;
Pathway : 0016020 // membrane // inferred from sequence or structural similarity
FlyMine data for FBgn0053543.
VDRC has 5 RNAi stocks for FBgn0053543 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	195 ± 5	4 of 4	16.00	Up
Head	35 ± 2	3 of 4	2.90	Up
Eye	3 ± 1	0 of 4	0.32	Down
Thoracicoabdominal ganglion	230 ± 7	4 of 4	18.90	Up
Salivary gland	10 ± 2	0 of 4	0.82	None
Crop	3 ± 1	0 of 4	0.30	Down
Midgut	14 ± 1	0 of 4	1.20	None
Tubule	6 ± 0	0 of 4	0.60	Down
Hindgut	3 ± 2	0 of 4	0.30	Down
Heart	2 ± 1	0 of 4	0.21	Down
Fat body	3 ± 3	0 of 4	0.27	Down
Ovary	6 ± 1	0 of 4	0.50	Down
Testis	9 ± 0	1 of 4	0.80	None
Male accessory glands	6 ± 3	0 of 4	0.50	None
Virgin spermatheca	2 ± 1	0 of 4	0.16	Down
Mated spermatheca	2 ± 1	0 of 4	0.18	Down
Adult carcass	5 ± 2	0 of 4	0.40	Down
Larval CNS	46 ± 6	4 of 4	3.84	Up
Larval Salivary gland	1 ± 0	0 of 4	0.12	Down
Larval midgut	7 ± 2	0 of 4	0.60	None
Larval tubule	8 ± 2	0 of 4	0.70	None
Larval hindgut	3 ± 1	0 of 4	0.30	Down
Larval fat body	5 ± 2	0 of 4	0.40	None
Larval trachea	2 ± 1	0 of 4	0.19	Down
Larval carcass	2 ± 0	0 of 4	0.22	Down
S2 cells (growing)	6 ± 0	0 of 4	0.56	Down
Whole fly	12 ± 1	0 of 4

Looking for FBgn0053543. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720