FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053548 through 18771 annotations produced 2 hits

msta (msta):

Annotation Number : CG32799
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053548
Gbrowse : chrX:2106878-2107808 (-) // 100.0 //
Probeset : 1632861_at
Accessions : protein= NP_001014717; /// NP_001014718;, nucleotide= NM_001014717; /// NM_001014718;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0016564 // transcription repressor activity // inferred from direct assay
FlyMine data for FBgn0053548.
VDRC has 1 RNAi stocks for FBgn0053548 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	Down
Head	1 ± 0	0 of 4	0.40	Down
Eye	1 ± 0	0 of 4	0.33	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.80	None
Salivary gland	2 ± 1	0 of 4	0.76	None
Crop	83 ± 3	4 of 4	25.30	Up
Midgut	7 ± 1	0 of 4	2.10	None
Tubule	3 ± 0	0 of 4	1.10	None
Hindgut	22 ± 2	4 of 4	6.70	Up
Heart	8 ± 2	2 of 4	2.61	None
Fat body	4 ± 2	0 of 4	1.21	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	1 ± 0	0 of 4	0.40	Down
Male accessory glands	7 ± 1	0 of 4	2.10	None
Virgin spermatheca	0 ± 0	0 of 4	0.24	Down
Mated spermatheca	1 ± 0	0 of 4	0.29	Down
Adult carcass	4 ± 1	0 of 4	1.20	None
Larval CNS	0 ± 0	0 of 4	0.16	Down
Larval Salivary gland	2 ± 1	0 of 4	0.72	None
Larval midgut	4 ± 1	1 of 4	1.30	None
Larval tubule	4 ± 0	0 of 4	1.30	None
Larval hindgut	42 ± 4	4 of 4	12.74	Up
Larval fat body	1 ± 0	0 of 4	0.40	Down
Larval trachea	2 ± 2	0 of 4	0.79	None
Larval carcass	21 ± 5	2 of 4	6.66	Up
S2 cells (growing)	2 ± 1	0 of 4	0.75	None
Whole fly	3 ± 0	0 of 4

msta (msta):

Annotation Number : CG32800
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053548
Gbrowse : chrX:2099882-2102711 (-) // 100.0 //
Probeset : 1637662_at
Accessions : protein= NP_001014717; /// NP_001014718;, nucleotide= NM_001014717; /// NM_001014718;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay
Interpro : 0016564 // transcription repressor activity // inferred from direct assay
FlyMine data for FBgn0053548.
VDRC has 1 RNAi stocks for FBgn0053548 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	31 ± 1	4 of 4	0.40	Down
Head	665 ± 84	4 of 4	9.00	Up
Eye	2321 ± 131	4 of 4	31.51	Up
Thoracicoabdominal ganglion	11 ± 1	3 of 4	0.20	Down
Salivary gland	17 ± 3	1 of 4	0.24	Down
Crop	104 ± 3	4 of 4	1.40	Up
Midgut	16 ± 1	2 of 4	0.20	Down
Tubule	11 ± 1	3 of 4	0.10	Down
Hindgut	37 ± 2	4 of 4	0.50	Down
Heart	85 ± 4	4 of 4	1.15	None
Fat body	49 ± 16	4 of 4	0.67	None
Ovary	5 ± 1	1 of 4	0.10	Down
Testis	10 ± 1	3 of 4	0.10	Down
Male accessory glands	12 ± 0	0 of 4	0.20	Down
Virgin spermatheca	4 ± 0	1 of 4	0.06	Down
Mated spermatheca	6 ± 1	1 of 4	0.08	Down
Adult carcass	86 ± 6	4 of 4	1.20	None
Larval CNS	12 ± 5	4 of 4	0.17	Down
Larval Salivary gland	3 ± 1	0 of 4	0.05	Down
Larval midgut	10 ± 2	1 of 4	0.14	Down
Larval tubule	6 ± 2	1 of 4	0.10	Down
Larval hindgut	104 ± 5	4 of 4	1.41	Up
Larval fat body	10 ± 1	0 of 4	0.10	Down
Larval trachea	40 ± 62	3 of 4	0.55	None
Larval carcass	215 ± 13	4 of 4	2.93	Up
S2 cells (growing)	4 ± 1	0 of 4	0.06	Down
Whole fly	73 ± 7	4 of 4

Looking for FBgn0053548. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720