FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053696 through 18771 annotations produced 2 hits

(CG33696):

Annotation Number : CG16726
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053696
Gbrowse : chr3L:9637935-9639084 (+) // 100.0 //
Probeset : 1637355_at
Accessions : protein= NP_001027122;, nucleotide= NM_001031951;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane /
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0053696.
TRiP has 1 RNAi stocks for FBgn0053696 available for purchase.
VDRC has 4 RNAi stocks for FBgn0053696 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	53 ± 0	4 of 4	8.90	Up
Head	13 ± 1	4 of 4	2.20	Up
Eye	3 ± 1	1 of 4	0.60	None
Thoracicoabdominal ganglion	20 ± 4	4 of 4	3.50	Up
Salivary gland	17 ± 7	1 of 4	2.88	None
Crop	6 ± 1	1 of 4	1.10	None
Midgut	11 ± 0	4 of 4	1.80	Up
Tubule	4 ± 0	0 of 4	0.70	Down
Hindgut	6 ± 0	3 of 4	1.10	None
Heart	4 ± 1	1 of 4	0.74	None
Fat body	11 ± 5	3 of 4	2.00	None
Ovary	3 ± 1	1 of 4	0.50	None
Testis	3 ± 0	0 of 4	0.60	None
Male accessory glands	8 ± 1	1 of 4	1.40	None
Virgin spermatheca	8 ± 1	1 of 4	1.35	None
Mated spermatheca	8 ± 1	3 of 4	1.35	None
Adult carcass	13 ± 1	2 of 4	2.30	Up
Larval CNS	7 ± 0	4 of 4	1.34	None
Larval Salivary gland	8 ± 1	3 of 4	1.43	None
Larval midgut	14 ± 1	4 of 4	2.40	Up
Larval tubule	5 ± 0	1 of 4	1.00	None
Larval hindgut	6 ± 0	2 of 4	1.11	None
Larval fat body	13 ± 3	3 of 4	2.30	None
Larval trachea	1 ± 1	0 of 4	0.26	Down
Larval carcass	5 ± 0	0 of 4	0.95	None
S2 cells (growing)	6 ± 1	2 of 4	1.09	None
Whole fly	6 ± 1	2 of 4

(CG33696):

Annotation Number : CG32047
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053696
Gbrowse : chr3L:9643441-9647138 (+) // 96.6 //
Probeset : 1631364_at
Accessions : protein= NP_001027122;, nucleotide= NM_001031951;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane /
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0053696.
TRiP has 1 RNAi stocks for FBgn0053696 available for purchase.
VDRC has 4 RNAi stocks for FBgn0053696 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	69 ± 1	4 of 4	16.20	Up
Head	14 ± 3	3 of 4	3.40	Up
Eye	4 ± 0	0 of 4	1.04	None
Thoracicoabdominal ganglion	25 ± 2	4 of 4	6.10	Up
Salivary gland	7 ± 3	0 of 4	1.80	None
Crop	5 ± 2	0 of 4	1.20	None
Midgut	2 ± 1	0 of 4	0.60	None
Tubule	4 ± 1	0 of 4	1.10	None
Hindgut	3 ± 1	0 of 4	0.90	None
Heart	4 ± 1	0 of 4	1.08	None
Fat body	9 ± 0	2 of 4	2.12	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	5 ± 1	0 of 4	1.40	None
Male accessory glands	6 ± 2	1 of 4	1.60	None
Virgin spermatheca	7 ± 1	2 of 4	1.82	None
Mated spermatheca	7 ± 1	0 of 4	1.67	None
Adult carcass	12 ± 2	0 of 4	2.90	None
Larval CNS	17 ± 2	4 of 4	4.14	Up
Larval Salivary gland	5 ± 0	0 of 4	1.18	None
Larval midgut	5 ± 2	0 of 4	1.18	None
Larval tubule	3 ± 1	0 of 4	0.90	None
Larval hindgut	3 ± 1	0 of 4	0.78	None
Larval fat body	9 ± 2	0 of 4	2.20	None
Larval trachea	3 ± 2	0 of 4	0.85	None
Larval carcass	4 ± 1	0 of 4	1.02	None
S2 cells (growing)	1 ± 0	0 of 4	0.39	None
Whole fly	4 ± 2	0 of 4

Looking for FBgn0053696. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720