Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053757 through 18771 annotations produced 1 hits



(CG33757):

Annotation Number : Stencil:2R:4517497:4514928:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053757
Gbrowse : chr2R:5341801-5344370 (-) // 100.0 //
Probeset : 1639989_at
Accessions : protein= NP_001027398;, nucleotide= NM_001032227;
FlyMine data for FBgn0053757.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.70None
Head19 14 of 4 5.60Up
Eye4 12 of 4 1.36None
Thoracicoabdominal ganglion4 11 of 4 1.30None
Salivary gland13 30 of 4 3.94Up
Crop4 10 of 4 1.30None
Midgut6 11 of 4 1.70None
Tubule6 10 of 4 1.80Up
Hindgut5 10 of 4 1.60None
Heart2 00 of 4 0.67None
Fat body11 34 of 4 3.17Up
Ovary4 02 of 4 1.20None
Testis4 00 of 4 1.10None
Male accessory glands7 02 of 4 2.30Up
Virgin spermatheca8 04 of 4 2.46Up
Mated spermatheca11 14 of 4 3.25Up
Adult carcass7 11 of 4 2.20None
Larval CNS4 13 of 4 1.29None
Larval Salivary gland1 00 of 4 0.50None
Larval midgut2 00 of 4 0.79None
Larval tubule6 12 of 4 1.80None
Larval hindgut6 10 of 4 1.84None
Larval fat body8 22 of 4 2.50None
Larval trachea2 20 of 4 0.82None
Larval carcass3 00 of 4 0.89None
S2 cells (growing)1 00 of 4 0.36None
Whole fly3 11 of 4

Looking for FBgn0053757. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime