Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053983 through 18771 annotations produced 1 hits



CG33983 (obst-H):

Annotation Number : CG7973
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053983
Gbrowse : chr3L:15521456-15522330 (-) // 100.0 //
Probeset : 1631611_at
Accessions : protein= NP_001034020;, nucleotide= NM_001038931;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0008061 // chitin binding // inferred from reviewed computational analysis /// 0008061 // chitin binding // inferred fro
FlyMine data for FBgn0053983.
VDRC has 3 RNAi stocks for FBgn0053983 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 1.30None
Head1 00 of 4 0.60None
Eye7 10 of 4 3.40Up
Thoracicoabdominal ganglion0 00 of 4 0.30None
Salivary gland7 40 of 4 3.34None
Crop1 00 of 4 0.50None
Midgut6 20 of 4 3.10None
Tubule3 00 of 4 1.50None
Hindgut2 00 of 4 1.00None
Heart1 00 of 4 0.80None
Fat body1 00 of 4 0.51None
Ovary1 00 of 4 0.50None
Testis0 00 of 4 0.40None
Male accessory glands1 00 of 4 0.60None
Virgin spermatheca0 00 of 4 0.40None
Mated spermatheca1 00 of 4 0.51None
Adult carcass6 10 of 4 2.80None
Larval CNS0 00 of 4 0.31None
Larval Salivary gland75 284 of 434.71None
Larval midgut517 164 of 4237.97Up
Larval tubule2 20 of 4 1.20None
Larval hindgut0 00 of 4 0.30None
Larval fat body1 00 of 4 0.80None
Larval trachea2 20 of 4 1.11None
Larval carcass2 10 of 4 1.18None
S2 cells (growing)0 00 of 4 0.39None
Whole fly2 00 of 4

Looking for FBgn0053983. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime