FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0058178 through 18771 annotations produced 4 hits

/// (CG40178 /// CG41320):

Annotation Number : CG40178
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058178 /// FBgn0085612
Gbrowse : chr3LHet:1344052-1396405 (-) // 100.0 //
Probeset : 1625287_at
Accessions : protein= NP_001015187; /// NP_001015188;, nucleotide= NM_001015187; /// NM_001015188;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //
FlyMine data for FBgn0058178 /// FBgn0085612.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	343 ± 22	4 of 4	13.70	Up
Head	172 ± 32	4 of 4	6.90	Up
Eye	52 ± 3	4 of 4	2.09	Up
Thoracicoabdominal ganglion	202 ± 13	4 of 4	8.10	Up
Salivary gland	17 ± 3	2 of 4	0.71	None
Crop	28 ± 2	4 of 4	1.10	None
Midgut	10 ± 0	2 of 4	0.40	Down
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	23 ± 2	4 of 4	0.90	None
Heart	11 ± 2	3 of 4	0.46	Down
Fat body	28 ± 12	3 of 4	1.15	None
Ovary	17 ± 1	4 of 4	0.70	None
Testis	8 ± 0	4 of 4	0.40	Down
Male accessory glands	53 ± 6	4 of 4	2.10	Up
Virgin spermatheca	6 ± 0	1 of 4	0.24	Down
Mated spermatheca	4 ± 1	1 of 4	0.19	Down
Adult carcass	30 ± 5	4 of 4	1.20	None
Larval CNS	116 ± 13	4 of 4	4.64	Up
Larval Salivary gland	11 ± 0	4 of 4	0.47	Down
Larval midgut	10 ± 0	4 of 4	0.43	Down
Larval tubule	14 ± 1	3 of 4	0.60	Down
Larval hindgut	19 ± 1	4 of 4	0.77	None
Larval fat body	25 ± 3	4 of 4	1.00	None
Larval trachea	14 ± 2	4 of 4	0.58	Down
Larval carcass	10 ± 0	4 of 4	0.42	Down
S2 cells (growing)	84 ± 4	4 of 4	3.35	Up
Whole fly	25 ± 3	4 of 4

/// (CG40178 /// CG41320):

Annotation Number : CG40178
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058178 /// FBgn0085612
Gbrowse : chr3LHet:1344052-1396405 (-) // 100.0 //
Probeset : 1625862_x_at
Accessions : protein= NP_001015187; /// NP_001015188;, nucleotide= NM_001015187; /// NM_001015188;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //
FlyMine data for FBgn0058178 /// FBgn0085612.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	423 ± 37	4 of 4	14.40	Up
Head	231 ± 41	4 of 4	7.90	Up
Eye	61 ± 4	4 of 4	2.08	Up
Thoracicoabdominal ganglion	233 ± 22	4 of 4	7.90	Up
Salivary gland	29 ± 4	4 of 4	0.99	None
Crop	28 ± 2	4 of 4	1.00	None
Midgut	14 ± 1	3 of 4	0.50	Down
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	25 ± 0	4 of 4	0.90	None
Heart	14 ± 1	4 of 4	0.51	Down
Fat body	32 ± 14	4 of 4	1.11	None
Ovary	23 ± 2	4 of 4	0.80	None
Testis	11 ± 1	4 of 4	0.40	Down
Male accessory glands	62 ± 8	4 of 4	2.10	Up
Virgin spermatheca	7 ± 1	2 of 4	0.25	Down
Mated spermatheca	9 ± 1	3 of 4	0.33	Down
Adult carcass	34 ± 4	4 of 4	1.20	None
Larval CNS	145 ± 15	4 of 4	4.96	Up
Larval Salivary gland	11 ± 2	4 of 4	0.40	Down
Larval midgut	11 ± 1	4 of 4	0.39	Down
Larval tubule	14 ± 1	4 of 4	0.50	Down
Larval hindgut	22 ± 2	4 of 4	0.77	None
Larval fat body	26 ± 3	4 of 4	0.90	None
Larval trachea	15 ± 4	3 of 4	0.53	Down
Larval carcass	10 ± 1	4 of 4	0.37	Down
S2 cells (growing)	104 ± 5	4 of 4	3.57	Up
Whole fly	29 ± 2	4 of 4

():

Annotation Number : CG40178
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3LHet:1532254-1532848 (+) // 37.81 // /// chr3LHet:1334651-1396811 (-) // 100.0 //
Probeset : 1641383_s_at
Accessions : protein= NP_001015187; /// NP_001015188; /// NP_001104416;, nucleotide= NM_001015187; /// NM_001015188; /// NM_001110946;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	15 ± 1	4 of 4	3.40	Up
Head	5 ± 1	0 of 4	1.20	None
Eye	2 ± 1	0 of 4	0.52	None
Thoracicoabdominal ganglion	8 ± 1	0 of 4	1.90	None
Salivary gland	11 ± 3	0 of 4	2.40	None
Crop	7 ± 2	1 of 4	1.60	None
Midgut	7 ± 2	0 of 4	1.70	None
Tubule	4 ± 0	0 of 4	1.00	None
Hindgut	6 ± 1	2 of 4	1.40	None
Heart	2 ± 0	0 of 4	0.64	None
Fat body	11 ± 3	0 of 4	2.55	Up
Ovary	4 ± 1	0 of 4	0.90	None
Testis	13 ± 2	2 of 4	2.90	Up
Male accessory glands	13 ± 1	3 of 4	2.90	Up
Virgin spermatheca	5 ± 1	0 of 4	1.16	None
Mated spermatheca	8 ± 2	0 of 4	1.70	None
Adult carcass	8 ± 3	0 of 4	1.80	None
Larval CNS	9 ± 0	2 of 4	2.05	Up
Larval Salivary gland	8 ± 2	0 of 4	1.87	None
Larval midgut	2 ± 0	0 of 4	0.45	None
Larval tubule	6 ± 1	0 of 4	1.40	None
Larval hindgut	5 ± 1	0 of 4	1.16	None
Larval fat body	11 ± 3	2 of 4	2.40	None
Larval trachea	5 ± 3	0 of 4	1.24	None
Larval carcass	4 ± 0	0 of 4	0.94	None
S2 cells (growing)	5 ± 1	0 of 4	1.21	None
Whole fly	4 ± 1	0 of 4

/// (CG40178 /// CG41320):

Annotation Number : CG40380
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058178 /// FBgn0085612
Gbrowse : chr3LHet:1527665-1532652 (+) // 99.86 // /// chr3LHet:1351928-1356944 (-) // 99.59 //
Probeset : 1641523_at
Accessions : protein= NP_001015187; /// NP_001015188; /// NP_001104416;, nucleotide= NM_001015187; /// NM_001015188; /// NM_001110946;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //
FlyMine data for FBgn0058178 /// FBgn0085612.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 1	0 of 4	0.90	None
Head	18 ± 2	0 of 4	1.40	None
Eye	3 ± 1	0 of 4	0.28	Down
Thoracicoabdominal ganglion	16 ± 1	0 of 4	1.20	None
Salivary gland	43 ± 15	0 of 4	3.20	None
Crop	14 ± 4	0 of 4	1.10	None
Midgut	40 ± 2	0 of 4	3.00	Up
Tubule	12 ± 1	0 of 4	0.90	None
Hindgut	20 ± 0	1 of 4	1.50	None
Heart	4 ± 1	0 of 4	0.34	Down
Fat body	19 ± 8	0 of 4	1.41	None
Ovary	7 ± 1	0 of 4	0.60	None
Testis	10 ± 1	1 of 4	0.70	None
Male accessory glands	22 ± 2	0 of 4	1.70	Up
Virgin spermatheca	12 ± 3	0 of 4	0.92	None
Mated spermatheca	9 ± 3	0 of 4	0.68	None
Adult carcass	33 ± 6	0 of 4	2.50	Up
Larval CNS	11 ± 6	0 of 4	0.87	None
Larval Salivary gland	14 ± 2	0 of 4	1.09	None
Larval midgut	24 ± 3	0 of 4	1.78	None
Larval tubule	22 ± 2	1 of 4	1.70	None
Larval hindgut	12 ± 1	0 of 4	0.89	None
Larval fat body	15 ± 2	0 of 4	1.10	None
Larval trachea	9 ± 3	0 of 4	0.73	None
Larval carcass	18 ± 5	0 of 4	1.36	None
S2 cells (growing)	24 ± 2	3 of 4	1.82	Up
Whole fly	13 ± 2	2 of 4

Looking for FBgn0058178. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720