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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0058191 through 18771 annotations produced 1 hits



(CG40191):

Annotation Number : CG40191
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058191
Gbrowse : chr2RHet:390775-392804 (+) // 100.0 //
Probeset : 1629023_s_at
Accessions : protein= NP_001015174; /// NP_001015175; /// NP_001015176; /// NP_001104353;, nucleotide= NM_001015174; /// NM_001015175; /// NM_001015176; /// NM_001110883;
FlyMine data for FBgn0058191.
BDGP gene expression has embryonic in situ data for CG40191: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0058191 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain592 ± 124 of 4 0.90None
Head547 ± 384 of 4 0.80None
Eye648 ± 274 of 4 0.98None
Thoracicoabdominal ganglion508 ± 264 of 4 0.80Down
Salivary gland823 ± 174 of 4 1.24Up
Crop764 ± 154 of 4 1.20None
Midgut421 ± 84 of 4 0.60Down
Tubule724 ± 504 of 4 1.10None
Hindgut605 ± 94 of 4 0.90None
Heart456 ± 154 of 4 0.69Down
Fat body372 ± 184 of 4 0.56Down
Ovary1276 ± 284 of 4 1.90Up
Testis411 ± 224 of 4 0.60Down
Male accessory glands1299 ± 844 of 4 2.00Up
Virgin spermatheca411 ± 144 of 4 0.62Down
Mated spermatheca458 ± 244 of 4 0.69Down
Adult carcass384 ± 84 of 4 0.60Down
Larval CNS395 ± 194 of 4 0.60Down
Larval Salivary gland820 ± 204 of 4 1.24Up
Larval midgut260 ± 74 of 4 0.39Down
Larval tubule755 ± 154 of 4 1.10None
Larval hindgut450 ± 214 of 4 0.68Down
Larval fat body591 ± 594 of 4 0.90None
Larval trachea540 ± 264 of 4 0.81Down
Larval carcass332 ± 44 of 4 0.50Down
S2 cells (growing)507 ± 54 of 4 0.76Down
Whole fly663 ± 374 of 4

Looking for FBgn0058191. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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