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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0058263 through 18771 annotations produced 1 hits



/// (CG17108 /// CG40263):

Annotation Number : CG40263
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058263
Gbrowse : chr2RHet:1291789-1335947 (-) // 100.0 //
Probeset : 1635560_at
Accessions : protein= NP_001015095; /// NP_001015096; /// NP_001104365;, nucleotide= NM_001015095; /// NM_001015096; /// NM_001110895;
FlyMine data for FBgn0058263.
VDRC has 1 RNAi stocks for FBgn0058263 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain117 ± 144 of 4 2.70Up
Head60 ± 34 of 4 1.40Up
Eye43 ± 24 of 4 1.00None
Thoracicoabdominal ganglion112 ± 94 of 4 2.60Up
Salivary gland95 ± 14 of 4 2.18Up
Crop35 ± 14 of 4 0.80Down
Midgut218 ± 344 of 4 5.00Up
Tubule43 ± 24 of 4 1.00None
Hindgut42 ± 24 of 4 1.00None
Heart53 ± 24 of 4 1.21Up
Fat body99 ± 94 of 4 2.25Up
Ovary59 ± 04 of 4 1.30Up
Testis10 ± 11 of 4 0.20Down
Male accessory glands227 ± 64 of 4 5.20Up
Virgin spermatheca68 ± 44 of 4 1.57Up
Mated spermatheca88 ± 14 of 4 2.00Up
Adult carcass73 ± 74 of 4 1.70Up
Larval CNS41 ± 34 of 4 0.94None
Larval Salivary gland44 ± 24 of 4 1.01None
Larval midgut123 ± 94 of 4 2.81Up
Larval tubule53 ± 34 of 4 1.20None
Larval hindgut31 ± 24 of 4 0.70Down
Larval fat body63 ± 64 of 4 1.40Up
Larval trachea46 ± 54 of 4 1.06None
Larval carcass29 ± 24 of 4 0.67Down
S2 cells (growing)63 ± 44 of 4 1.45Up
Whole fly44 ± 23 of 4

Looking for FBgn0058263. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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