FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0058441 through 18771 annotations produced 2 hits

(CR40441):

Annotation Number : CG40441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058441
Gbrowse : chrYHet:205195-205372 (-) // 100.0 //
Probeset : 1629415_x_at
Accessions : protein= NP_001104483;, nucleotide= NM_001111013;
FlyMine data for FBgn0058441.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 1	0 of 4	1.30	None
Head	0 ± 0	0 of 4	0.80	None
Eye	1 ± 1	0 of 4	1.67	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.00	None
Salivary gland	3 ± 2	0 of 4	3.26	None
Crop	0 ± 0	0 of 4	0.30	None
Midgut	0 ± 0	0 of 4	0.80	None
Tubule	0 ± 0	0 of 4	0.70	None
Hindgut	0 ± 0	0 of 4	0.40	None
Heart	0 ± 0	0 of 4	0.56	None
Fat body	1 ± 2	0 of 4	1.67	None
Ovary	1 ± 0	0 of 4	1.10	None
Testis	0 ± 0	0 of 4	0.60	None
Male accessory glands	1 ± 0	0 of 4	1.10	None
Virgin spermatheca	0 ± 0	0 of 4	0.33	None
Mated spermatheca	0 ± 0	0 of 4	0.86	None
Adult carcass	2 ± 1	0 of 4	1.80	None
Larval CNS	0 ± 0	0 of 4	0.63	None
Larval Salivary gland	0 ± 0	0 of 4	0.53	None
Larval midgut	0 ± 0	0 of 4	0.70	None
Larval tubule	0 ± 0	0 of 4	0.40	None
Larval hindgut	0 ± 0	0 of 4	0.23	None
Larval fat body	2 ± 1	0 of 4	2.00	None
Larval trachea	2 ± 1	0 of 4	2.47	None
Larval carcass	2 ± 1	0 of 4	1.91	None
S2 cells (growing)	0 ± 0	0 of 4	0.37	None
Whole fly	1 ± 0	0 of 4

(CR40441):

Annotation Number : CG40441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0058441
Gbrowse : chrYHet:205195-205372 (-) // 100.0 //
Probeset : 1636024_at
Accessions : protein= NP_001104483;, nucleotide= NM_001111013;
FlyMine data for FBgn0058441.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	5.10	None
Head	0 ± 0	0 of 4	1.60	None
Eye	1 ± 0	0 of 4	3.21	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.80	None
Salivary gland	3 ± 1	0 of 4	8.86	None
Crop	0 ± 0	0 of 4	0.90	None
Midgut	0 ± 0	0 of 4	1.30	None
Tubule	0 ± 0	0 of 4	1.70	None
Hindgut	0 ± 0	0 of 4	0.60	None
Heart	0 ± 0	0 of 4	2.79	None
Fat body	0 ± 0	0 of 4	1.14	None
Ovary	0 ± 0	0 of 4	1.90	None
Testis	0 ± 0	0 of 4	0.70	None
Male accessory glands	2 ± 1	0 of 4	5.90	None
Virgin spermatheca	0 ± 0	0 of 4	0.86	None
Mated spermatheca	0 ± 0	0 of 4	0.93	None
Adult carcass	0 ± 0	0 of 4	2.40	None
Larval CNS	1 ± 0	0 of 4	3.43	None
Larval Salivary gland	2 ± 1	0 of 4	6.07	None
Larval midgut	0 ± 0	0 of 4	1.21	None
Larval tubule	0 ± 0	0 of 4	0.90	None
Larval hindgut	0 ± 0	0 of 4	0.64	None
Larval fat body	2 ± 1	0 of 4	6.00	None
Larval trachea	0 ± 0	0 of 4	0.79	None
Larval carcass	0 ± 0	0 of 4	1.14	None
S2 cells (growing)	0 ± 0	0 of 4	0.43	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0058441. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720