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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0061435 through 18771 annotations produced 1 hits



(CG30270):

Annotation Number : CG30270
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0061435
Gbrowse : chr2R:18671803-18672439 (+) // 100.0 //
Probeset : 1632254_a_at
Accessions : protein= NP_726241; /// NP_726242;, nucleotide= NM_166552; /// NM_166553;
FlyMine data for FBgn0061435.
VDRC has 2 RNAi stocks for FBgn0061435 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye2 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion5 ± 21 of 4 0.00Down
Salivary gland8 ± 10 of 4 0.06Down
Crop2 ± 00 of 4 0.00Down
Midgut3 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart2 ± 00 of 4 0.02Down
Fat body8 ± 14 of 4 0.06Down
Ovary1 ± 00 of 4 0.00Down
Testis1418 ± 214 of 410.50Up
Male accessory glands5 ± 20 of 4 0.00Down
Virgin spermatheca3 ± 00 of 4 0.03Down
Mated spermatheca9 ± 02 of 4 0.07Down
Adult carcass7 ± 20 of 4 0.10Down
Larval CNS3 ± 00 of 4 0.03Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut3 ± 10 of 4 0.03Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut2 ± 00 of 4 0.02Down
Larval fat body188 ± 1104 of 4 1.40None
Larval trachea6 ± 101 of 4 0.05Down
Larval carcass3 ± 10 of 4 0.02Down
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly134 ± 104 of 4

Looking for FBgn0061435. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime