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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0063368 through 18771 annotations produced 1 hits



beta-glycoprotein-hormone-related-polypeptide (Gpb5):

Annotation Number : CG40041
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063368
Gbrowse : chr2LHet:167395-168734 (+) // 100.0 //
Probeset : 1639116_at
Accessions : protein= NP_001104334; /// NP_001104335;, nucleotide= NM_001110864; /// NM_001110865;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005179 // hormone activity // inferred from direct assay /// 0005179 // hormone activity // non-traceable author statem
FlyMine data for FBgn0063368.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain144 134 of 413.90Up
Head39 24 of 4 3.70Up
Eye9 22 of 4 0.88None
Thoracicoabdominal ganglion469 474 of 444.90Up
Salivary gland20 40 of 4 1.95None
Crop9 20 of 4 0.90None
Midgut15 12 of 4 1.50Up
Tubule8 00 of 4 0.80Down
Hindgut16 04 of 4 1.60Up
Heart7 10 of 4 0.72None
Fat body8 30 of 4 0.78None
Ovary8 11 of 4 0.80None
Testis10 04 of 4 1.00None
Male accessory glands14 11 of 4 1.40None
Virgin spermatheca16 12 of 4 1.60Up
Mated spermatheca17 04 of 4 1.66Up
Adult carcass21 41 of 4 2.10None
Larval CNS121 264 of 411.65Up
Larval Salivary gland22 13 of 4 2.12Up
Larval midgut8 10 of 4 0.85None
Larval tubule12 04 of 4 1.20None
Larval hindgut10 11 of 4 0.97None
Larval fat body10 10 of 4 1.00None
Larval trachea6 33 of 4 0.63None
Larval carcass13 01 of 4 1.25None
S2 cells (growing)4 01 of 4 0.40Down
Whole fly10 14 of 4

Looking for FBgn0063368. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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