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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0063493 through 18771 annotations produced 1 hits



Glutathione S transferase E7 (GstE7):

Annotation Number : CG17531
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063493
Gbrowse : chr2R:14294439-14295193 (+) // 100.0 //
Probeset : 1640065_at
Accessions : protein= NP_611329;, nucleotide= NM_137485;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0063493.
BioGrid reports that CG17531 interacts with CG18584 CG9842 .
VDRC has 3 RNAi stocks for FBgn0063493 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain57 ± 34 of 4 0.30Down
Head177 ± 94 of 4 1.00None
Eye108 ± 74 of 4 0.60Down
Thoracicoabdominal ganglion80 ± 14 of 4 0.40Down
Salivary gland38 ± 13 of 4 0.21Down
Crop211 ± 74 of 4 1.20Up
Midgut1451 ± 1024 of 4 8.10Up
Tubule1917 ± 1644 of 410.70Up
Hindgut340 ± 154 of 4 1.90Up
Heart216 ± 364 of 4 1.20None
Fat body193 ± 504 of 4 1.08None
Ovary122 ± 84 of 4 0.70Down
Testis28 ± 24 of 4 0.20Down
Male accessory glands56 ± 24 of 4 0.30Down
Virgin spermatheca226 ± 104 of 4 1.26Up
Mated spermatheca133 ± 174 of 4 0.74None
Adult carcass166 ± 54 of 4 0.90None
Larval CNS39 ± 64 of 4 0.22Down
Larval Salivary gland26 ± 14 of 4 0.15Down
Larval midgut1030 ± 734 of 4 5.74Up
Larval tubule708 ± 1284 of 4 3.90Up
Larval hindgut342 ± 304 of 4 1.91Up
Larval fat body793 ± 1034 of 4 4.40Up
Larval trachea57 ± 84 of 4 0.32Down
Larval carcass114 ± 74 of 4 0.64Down
S2 cells (growing)164 ± 104 of 4 0.92None
Whole fly179 ± 84 of 4

Looking for FBgn0063493. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime