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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0063499 through 18771 annotations produced 1 hits



Glutathione S transferase E10 (GstE10):

Annotation Number : CG17522
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063499
Gbrowse : chr2R:14284247-14284970 (-) // 100.0 //
Probeset : 1628328_at
Accessions : protein= NP_611322;, nucleotide= NM_137478;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0063499.
VDRC has 3 RNAi stocks for FBgn0063499 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 00 of 4 0.10Down
Head9 ± 30 of 4 0.10Down
Eye4 ± 10 of 4 0.04Down
Thoracicoabdominal ganglion14 ± 22 of 4 0.10Down
Salivary gland4 ± 10 of 4 0.04Down
Crop11 ± 10 of 4 0.10Down
Midgut31 ± 10 of 4 0.30Down
Tubule3138 ± 4664 of 427.50Up
Hindgut57 ± 34 of 4 0.50Down
Heart10 ± 42 of 4 0.09Down
Fat body10 ± 130 of 4 0.09Down
Ovary36 ± 64 of 4 0.30Down
Testis11 ± 10 of 4 0.10Down
Male accessory glands6 ± 30 of 4 0.10Down
Virgin spermatheca12 ± 61 of 4 0.11Down
Mated spermatheca6 ± 20 of 4 0.06Down
Adult carcass18 ± 40 of 4 0.20Down
Larval CNS2 ± 30 of 4 0.02Down
Larval Salivary gland4 ± 20 of 4 0.04Down
Larval midgut333 ± 364 of 4 2.92Up
Larval tubule1730 ± 1294 of 415.10Up
Larval hindgut35 ± 33 of 4 0.31Down
Larval fat body1 ± 00 of 4 0.00Down
Larval trachea1 ± 20 of 4 0.02Down
Larval carcass3 ± 10 of 4 0.03Down
S2 cells (growing)19 ± 20 of 4 0.17Down
Whole fly114 ± 64 of 4

Looking for FBgn0063499. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime