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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0063667 through 18771 annotations produced 1 hits



(CG32335):

Annotation Number : CG32335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063667
Gbrowse : chr3L:1201870-1203083 (-) // 100.0 //
Probeset : 1625657_at
Accessions : protein= NP_728575;, nucleotide= NM_167858;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : "0008270 // zinc ion binding // inferred from electronic annotation /// 0016788 // hydrolase activity
FlyMine data for FBgn0063667.
VDRC has 2 RNAi stocks for FBgn0063667 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain19 ± 22 of 4 1.00None
Head32 ± 14 of 4 1.70Up
Eye15 ± 33 of 4 0.78None
Thoracicoabdominal ganglion25 ± 14 of 4 1.30None
Salivary gland19 ± 30 of 4 1.00None
Crop11 ± 10 of 4 0.60Down
Midgut133 ± 24 of 4 6.90Up
Tubule76 ± 54 of 4 3.90Up
Hindgut23 ± 21 of 4 1.20None
Heart64 ± 24 of 4 3.33Up
Fat body46 ± 94 of 4 2.40Up
Ovary10 ± 20 of 4 0.60None
Testis14 ± 13 of 4 0.80None
Male accessory glands5 ± 10 of 4 0.30Down
Virgin spermatheca69 ± 84 of 4 3.62Up
Mated spermatheca32 ± 64 of 4 1.69None
Adult carcass41 ± 53 of 4 2.10Up
Larval CNS10 ± 11 of 4 0.54Down
Larval Salivary gland16 ± 11 of 4 0.84None
Larval midgut42 ± 60 of 4 2.20Up
Larval tubule24 ± 23 of 4 1.30None
Larval hindgut19 ± 11 of 4 1.02None
Larval fat body156 ± 404 of 4 8.10Up
Larval trachea17 ± 11 of 4 0.91None
Larval carcass26 ± 11 of 4 1.40Up
S2 cells (growing)12 ± 20 of 4 0.66None
Whole fly19 ± 20 of 4

Looking for FBgn0063667. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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