Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0063670 through 18771 annotations produced 1 hits



/// /// GA17880 /// /// (CG40228 /// DmojCG40228 /// DpseGA17880 /// DvirCG40228 /// DwilCG40228):

Annotation Number : CG40228
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0063670
Gbrowse : chr3LHet:2190054-2190710 (-) // 100.0 //
Probeset : 1634593_at
Accessions : protein= NP_001104426;, nucleotide= NM_001110956;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0046872 // metal ion binding // inferred from elect
FlyMine data for FBgn0063670.
VDRC has 1 RNAi stocks for FBgn0063670 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain723 ± 254 of 4 1.30Up
Head589 ± 384 of 4 1.10None
Eye462 ± 284 of 4 0.84None
Thoracicoabdominal ganglion699 ± 434 of 4 1.30Up
Salivary gland285 ± 314 of 4 0.52Down
Crop275 ± 194 of 4 0.50Down
Midgut310 ± 204 of 4 0.60Down
Tubule162 ± 114 of 4 0.30Down
Hindgut359 ± 144 of 4 0.70Down
Heart188 ± 64 of 4 0.34Down
Fat body247 ± 144 of 4 0.45Down
Ovary996 ± 324 of 4 1.80Up
Testis125 ± 134 of 4 0.20Down
Male accessory glands604 ± 514 of 4 1.10None
Virgin spermatheca224 ± 34 of 4 0.41Down
Mated spermatheca237 ± 154 of 4 0.43Down
Adult carcass219 ± 184 of 4 0.40Down
Larval CNS860 ± 1294 of 4 1.57Up
Larval Salivary gland494 ± 654 of 4 0.90None
Larval midgut463 ± 134 of 4 0.85None
Larval tubule431 ± 214 of 4 0.80Down
Larval hindgut521 ± 194 of 4 0.95None
Larval fat body643 ± 774 of 4 1.20None
Larval trachea384 ± 64 of 4 0.70Down
Larval carcass519 ± 124 of 4 0.95None
S2 cells (growing)481 ± 154 of 4 0.88None
Whole fly547 ± 304 of 4

Looking for FBgn0063670. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime