FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0064119 through 18771 annotations produced 1 hits

/// I'm not dead yet 2 (CG33934 /// Indy-2):

Annotation Number : CG32921
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0064119 /// FBgn0260466
Gbrowse : chr3R:15868478-15874444 (+) // 100.0 //
Probeset : 1637762_s_at
Accessions : protein= NP_001027199; /// NP_001027200; /// NP_001027201; /// NP_001027202; /// NP_001163660;, nucleotide= NM_001032028; /// NM_001032029; /// NM_001032030; /// NM_001032031; /// NM_001170189;
Pathway : 0005887 // integral to plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inf
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0015137 // citrate transmembrane transporter
FlyMine data for FBgn0064119 /// FBgn0260466.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.10	Down
Head	1 ± 1	0 of 4	0.00	Down
Eye	0 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.10	Down
Salivary gland	6 ± 2	0 of 4	0.10	Down
Crop	1 ± 0	0 of 4	0.00	Down
Midgut	5 ± 2	0 of 4	0.10	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	5 ± 0	0 of 4	0.10	Down
Heart	1 ± 0	0 of 4	0.02	Down
Fat body	8 ± 4	0 of 4	0.13	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	795 ± 36	4 of 4	12.10	Up
Male accessory glands	6 ± 2	0 of 4	0.10	Down
Virgin spermatheca	2 ± 0	0 of 4	0.04	Down
Mated spermatheca	4 ± 1	0 of 4	0.07	Down
Adult carcass	8 ± 2	0 of 4	0.10	Down
Larval CNS	3 ± 2	0 of 4	0.05	Down
Larval Salivary gland	4 ± 1	0 of 4	0.06	Down
Larval midgut	6 ± 2	0 of 4	0.09	Down
Larval tubule	4 ± 1	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.02	Down
Larval fat body	91 ± 47	4 of 4	1.40	None
Larval trachea	4 ± 2	0 of 4	0.06	Down
Larval carcass	3 ± 0	0 of 4	0.05	Down
S2 cells (growing)	2 ± 1	0 of 4	0.04	Down
Whole fly	65 ± 3	4 of 4

Looking for FBgn0064119. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720