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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0067102 through 18771 annotations produced 1 hits



ceramide glucosyltransferase (GlcT-1):

Annotation Number : CG6437
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0067102
Gbrowse : chr2R:17963546-17965177 (+) // 100.0 //
Probeset : 1639432_at
Accessions : protein= NP_611636;, nucleotide= NM_137792;
Pathway : 0000139 // Golgi membrane // inferred from direct assay /// 0005789 // endoplasmic reticulum membrane // inferred from d
Interpro : "0008120 // ceramide glucosyltransferase activity // inferred from direct assay /// 0008120 // ceramide glucosyltransfer
FlyMine data for FBgn0067102.
VDRC has 5 RNAi stocks for FBgn0067102 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain14 ± 21 of 4 0.50Down
Head9 ± 20 of 4 0.30Down
Eye11 ± 11 of 4 0.36Down
Thoracicoabdominal ganglion11 ± 31 of 4 0.40Down
Salivary gland19 ± 50 of 4 0.61None
Crop19 ± 12 of 4 0.60Down
Midgut37 ± 63 of 4 1.20None
Tubule12 ± 11 of 4 0.40Down
Hindgut21 ± 20 of 4 0.70None
Heart15 ± 42 of 4 0.51Down
Fat body26 ± 73 of 4 0.84None
Ovary64 ± 54 of 4 2.10Up
Testis4 ± 10 of 4 0.10Down
Male accessory glands17 ± 13 of 4 0.60Down
Virgin spermatheca8 ± 20 of 4 0.27Down
Mated spermatheca9 ± 11 of 4 0.29Down
Adult carcass18 ± 31 of 4 0.60Down
Larval CNS12 ± 33 of 4 0.40Down
Larval Salivary gland18 ± 31 of 4 0.59Down
Larval midgut26 ± 40 of 4 0.85None
Larval tubule21 ± 22 of 4 0.70None
Larval hindgut26 ± 34 of 4 0.84None
Larval fat body26 ± 24 of 4 0.80None
Larval trachea10 ± 20 of 4 0.34Down
Larval carcass17 ± 11 of 4 0.56Down
S2 cells (growing)86 ± 14 of 4 2.75Up
Whole fly31 ± 34 of 4

Looking for FBgn0067102. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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