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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0069923 through 18771 annotations produced 1 hits



(CG41128):

Annotation Number : RH61753
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0069923
Gbrowse : chr3RHet:1806525-1808463 (-) // 100.0 //
Probeset : 1638052_at
Accessions : protein= NP_001015402;, nucleotide= NM_001015402;
FlyMine data for FBgn0069923.
VDRC has 1 RNAi stocks for FBgn0069923 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1141 ± 404 of 4 1.40Up
Head954 ± 334 of 4 1.20None
Eye722 ± 434 of 4 0.90None
Thoracicoabdominal ganglion1272 ± 614 of 4 1.60Up
Salivary gland1565 ± 814 of 4 1.95Up
Crop842 ± 414 of 4 1.10None
Midgut769 ± 214 of 4 1.00None
Tubule1095 ± 214 of 4 1.40Up
Hindgut1109 ± 314 of 4 1.40Up
Heart561 ± 354 of 4 0.70Down
Fat body1012 ± 644 of 4 1.26Up
Ovary919 ± 114 of 4 1.10None
Testis102 ± 54 of 4 0.10Down
Male accessory glands1211 ± 414 of 4 1.50Up
Virgin spermatheca995 ± 494 of 4 1.24Up
Mated spermatheca1042 ± 344 of 4 1.30Up
Adult carcass1158 ± 544 of 4 1.40Up
Larval CNS1072 ± 864 of 4 1.34Up
Larval Salivary gland1364 ± 764 of 4 1.70Up
Larval midgut836 ± 164 of 4 1.04None
Larval tubule885 ± 404 of 4 1.10None
Larval hindgut1559 ± 364 of 4 1.94Up
Larval fat body654 ± 804 of 4 0.80None
Larval trachea461 ± 284 of 4 0.57Down
Larval carcass930 ± 954 of 4 1.16None
S2 cells (growing)70 ± 04 of 4 0.09Down
Whole fly802 ± 544 of 4

Looking for FBgn0069923. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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