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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0082585 through 18771 annotations produced 1 hits



sprite (sprt):

Annotation Number : CG30023
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0082585
Gbrowse : chr2R:7272237-7284935 (-) // 100.0 //
Probeset : 1624510_at
Accessions : protein= NP_610683;, nucleotide= NM_136839;
Pathway : 0016023 // cytoplasmic membrane-bounded vesicle // inferred from direct assay /// 0016328 // lateral plasma membrane //
Interpro : 0005515 // protein binding // inferred from electronic annotation
FlyMine data for FBgn0082585.
VDRC has 3 RNAi stocks for FBgn0082585 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain22 ± 34 of 4 0.80None
Head46 ± 04 of 4 1.80Up
Eye68 ± 64 of 4 2.65Up
Thoracicoabdominal ganglion33 ± 14 of 4 1.30None
Salivary gland46 ± 74 of 4 1.78None
Crop40 ± 54 of 4 1.60None
Midgut23 ± 14 of 4 0.90None
Tubule31 ± 14 of 4 1.20Up
Hindgut20 ± 24 of 4 0.80None
Heart33 ± 24 of 4 1.28None
Fat body16 ± 43 of 4 0.65None
Ovary6 ± 11 of 4 0.20Down
Testis7 ± 03 of 4 0.30Down
Male accessory glands9 ± 10 of 4 0.40Down
Virgin spermatheca17 ± 13 of 4 0.69None
Mated spermatheca19 ± 34 of 4 0.75None
Adult carcass74 ± 44 of 4 2.90Up
Larval CNS23 ± 54 of 4 0.89None
Larval Salivary gland23 ± 14 of 4 0.90None
Larval midgut6 ± 20 of 4 0.24Down
Larval tubule83 ± 64 of 4 3.20Up
Larval hindgut14 ± 21 of 4 0.56Down
Larval fat body7 ± 21 of 4 0.30Down
Larval trachea49 ± 34 of 4 1.89Up
Larval carcass35 ± 44 of 4 1.39None
S2 cells (growing)65 ± 74 of 4 2.54Up
Whole fly25 ± 34 of 4

Looking for FBgn0082585. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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