FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0083167 through 18771 annotations produced 1 hits

putative noncoding RNA 006:X (Neb-cGP):

Annotation Number : CG15304
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083167
Gbrowse : chrX:10354776-10355335 (+) // 100.0 //
Probeset : 1640624_s_at
Accessions : protein= NP_652548;, nucleotide= NM_144291;
FlyMine data for FBgn0083167.
VDRC has 3 RNAi stocks for FBgn0083167 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1440 ± 50	4 of 4	0.80	Down
Head	1948 ± 89	4 of 4	1.00	None
Eye	1919 ± 54	4 of 4	1.01	None
Thoracicoabdominal ganglion	1960 ± 89	4 of 4	1.00	None
Salivary gland	3192 ± 146	4 of 4	1.69	Up
Crop	1581 ± 106	4 of 4	0.80	None
Midgut	1704 ± 44	4 of 4	0.90	None
Tubule	1513 ± 49	4 of 4	0.80	Down
Hindgut	2681 ± 92	4 of 4	1.40	Up
Heart	2375 ± 122	4 of 4	1.26	Up
Fat body	2208 ± 165	4 of 4	1.17	Up
Ovary	884 ± 15	4 of 4	0.50	Down
Testis	396 ± 9	4 of 4	0.20	Down
Male accessory glands	1177 ± 62	4 of 4	0.60	Down
Virgin spermatheca	1553 ± 44	4 of 4	0.82	Down
Mated spermatheca	1406 ± 81	4 of 4	0.74	Down
Adult carcass	3214 ± 141	4 of 4	1.70	Up
Larval CNS	1143 ± 69	4 of 4	0.60	Down
Larval Salivary gland	1977 ± 48	4 of 4	1.05	None
Larval midgut	1748 ± 38	4 of 4	0.92	None
Larval tubule	1313 ± 151	4 of 4	0.70	Down
Larval hindgut	2554 ± 51	4 of 4	1.35	Up
Larval fat body	529 ± 63	4 of 4	0.30	Down
Larval trachea	1212 ± 72	4 of 4	0.64	Down
Larval carcass	2262 ± 197	4 of 4	1.20	None
S2 cells (growing)	723 ± 10	4 of 4	0.38	Down
Whole fly	1891 ± 71	4 of 4

Looking for FBgn0083167. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720