FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0083945 through 18771 annotations produced 5 hits

(CG34109):

Annotation Number : Stencil:2L:10098572:10104155:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083945
Gbrowse : chr2L:10106163-10111746 (+) // 100.0 //
Probeset : 1627076_at
Accessions : protein= NP_001036351;, nucleotide= NM_001042886;
FlyMine data for FBgn0083945.
VDRC has 7 RNAi stocks for FBgn0083945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	2 of 4	0.70	None
Head	3 ± 1	0 of 4	0.80	None
Eye	5 ± 1	0 of 4	1.21	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.50	None
Salivary gland	8 ± 2	0 of 4	1.92	None
Crop	2 ± 0	0 of 4	0.60	None
Midgut	6 ± 1	0 of 4	1.40	None
Tubule	6 ± 0	0 of 4	1.50	Up
Hindgut	7 ± 1	2 of 4	1.60	None
Heart	1 ± 0	0 of 4	0.43	None
Fat body	6 ± 1	3 of 4	1.42	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	2 ± 0	1 of 4	0.60	None
Male accessory glands	10 ± 2	2 of 4	2.20	None
Virgin spermatheca	6 ± 1	3 of 4	1.39	None
Mated spermatheca	3 ± 1	1 of 4	0.86	None
Adult carcass	5 ± 1	0 of 4	1.30	None
Larval CNS	3 ± 0	1 of 4	0.66	None
Larval Salivary gland	5 ± 2	0 of 4	1.26	None
Larval midgut	7 ± 0	3 of 4	1.59	None
Larval tubule	5 ± 0	1 of 4	1.20	None
Larval hindgut	3 ± 0	1 of 4	0.65	None
Larval fat body	5 ± 2	1 of 4	1.20	None
Larval trachea	3 ± 1	1 of 4	0.75	None
Larval carcass	2 ± 0	0 of 4	0.63	None
S2 cells (growing)	3 ± 0	0 of 4	0.83	None
Whole fly	4 ± 1	2 of 4

(CG34109):

Annotation Number : CG12441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083945
Gbrowse : chr2L:10124054-10125631 (+) // 100.0 //
Probeset : 1635590_a_at
Accessions : protein= NP_001036351;, nucleotide= NM_001042886;
FlyMine data for FBgn0083945.
VDRC has 7 RNAi stocks for FBgn0083945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.20	Down
Head	6 ± 0	0 of 4	0.30	Down
Eye	5 ± 1	0 of 4	0.30	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.20	Down
Salivary gland	6 ± 4	0 of 4	0.36	None
Crop	4 ± 1	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	1031 ± 30	4 of 4	53.40	Up
Heart	3 ± 1	0 of 4	0.20	Down
Fat body	8 ± 4	1 of 4	0.42	Down
Ovary	6 ± 1	0 of 4	0.30	Down
Testis	47 ± 3	4 of 4	2.50	Up
Male accessory glands	8 ± 2	0 of 4	0.40	Down
Virgin spermatheca	5 ± 1	0 of 4	0.29	Down
Mated spermatheca	8 ± 1	0 of 4	0.43	Down
Adult carcass	6 ± 2	1 of 4	0.30	Down
Larval CNS	3 ± 1	0 of 4	0.20	Down
Larval Salivary gland	4 ± 1	0 of 4	0.23	Down
Larval midgut	1 ± 0	0 of 4	0.08	Down
Larval tubule	2 ± 0	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.07	Down
Larval fat body	14 ± 3	1 of 4	0.70	None
Larval trachea	5 ± 2	0 of 4	0.27	Down
Larval carcass	2 ± 0	0 of 4	0.11	Down
S2 cells (growing)	3 ± 1	0 of 4	0.20	Down
Whole fly	19 ± 2	4 of 4

(CG34109):

Annotation Number : CG12441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083945
Gbrowse : chr2L:10124054-10125631 (+) // 100.0 //
Probeset : 1627604_at
Accessions : protein= NP_001036351;, nucleotide= NM_001042886;
FlyMine data for FBgn0083945.
VDRC has 7 RNAi stocks for FBgn0083945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	Down
Head	0 ± 0	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.17	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.10	Down
Salivary gland	2 ± 0	0 of 4	0.29	Down
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.20	Down
Hindgut	529 ± 26	4 of 4	59.20	Up
Heart	1 ± 0	0 of 4	0.11	Down
Fat body	1 ± 0	0 of 4	0.13	Down
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	24 ± 1	4 of 4	2.80	Up
Male accessory glands	0 ± 0	0 of 4	0.10	Down
Virgin spermatheca	0 ± 0	0 of 4	0.08	Down
Mated spermatheca	1 ± 0	0 of 4	0.13	Down
Adult carcass	2 ± 1	0 of 4	0.30	Down
Larval CNS	0 ± 0	0 of 4	0.11	Down
Larval Salivary gland	1 ± 0	0 of 4	0.15	Down
Larval midgut	2 ± 0	0 of 4	0.23	Down
Larval tubule	2 ± 1	0 of 4	0.20	Down
Larval hindgut	0 ± 0	0 of 4	0.06	Down
Larval fat body	5 ± 2	1 of 4	0.60	None
Larval trachea	2 ± 2	0 of 4	0.31	Down
Larval carcass	0 ± 0	0 of 4	0.08	Down
S2 cells (growing)	0 ± 0	0 of 4	0.06	Down
Whole fly	9 ± 0	4 of 4

(CG34109):

Annotation Number : CG13129
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083945
Gbrowse : chr2L:10117905-10118202 (+) // 100.0 //
Probeset : 1639797_at
Accessions : protein= NP_001036351;, nucleotide= NM_001042886;
FlyMine data for FBgn0083945.
VDRC has 7 RNAi stocks for FBgn0083945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.20	Down
Head	8 ± 1	0 of 4	0.50	Down
Eye	3 ± 1	0 of 4	0.23	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.20	Down
Salivary gland	24 ± 3	0 of 4	1.45	None
Crop	11 ± 0	0 of 4	0.70	None
Midgut	6 ± 1	0 of 4	0.40	Down
Tubule	7 ± 0	0 of 4	0.40	Down
Hindgut	566 ± 24	4 of 4	33.60	Up
Heart	7 ± 0	1 of 4	0.43	Down
Fat body	16 ± 5	1 of 4	1.00	None
Ovary	2 ± 0	0 of 4	0.10	Down
Testis	3 ± 1	0 of 4	0.20	Down
Male accessory glands	7 ± 2	0 of 4	0.40	Down
Virgin spermatheca	10 ± 0	0 of 4	0.65	None
Mated spermatheca	10 ± 1	0 of 4	0.63	None
Adult carcass	13 ± 2	0 of 4	0.80	None
Larval CNS	4 ± 2	0 of 4	0.26	Down
Larval Salivary gland	8 ± 1	1 of 4	0.50	Down
Larval midgut	7 ± 2	0 of 4	0.42	Down
Larval tubule	4 ± 1	0 of 4	0.30	Down
Larval hindgut	5 ± 1	1 of 4	0.30	Down
Larval fat body	5 ± 2	0 of 4	0.30	Down
Larval trachea	1 ± 1	0 of 4	0.11	Down
Larval carcass	2 ± 1	0 of 4	0.14	Down
S2 cells (growing)	8 ± 1	0 of 4	0.50	Down
Whole fly	16 ± 2	3 of 4

(CG34109):

Annotation Number : CG13128
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083945
Gbrowse : chr2L:10103638-10105158 (+) // 100.0 //
Probeset : 1625301_at
Accessions : protein= NP_001036351;, nucleotide= NM_001042886;
FlyMine data for FBgn0083945.
VDRC has 7 RNAi stocks for FBgn0083945 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	1.30	None
Head	3 ± 0	0 of 4	0.70	None
Eye	5 ± 1	0 of 4	1.21	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.60	None
Salivary gland	5 ± 1	0 of 4	1.27	None
Crop	1 ± 0	0 of 4	0.40	None
Midgut	2 ± 0	0 of 4	0.60	None
Tubule	3 ± 1	0 of 4	0.70	None
Hindgut	179 ± 8	4 of 4	38.90	Up
Heart	4 ± 1	0 of 4	1.01	None
Fat body	6 ± 5	0 of 4	1.49	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	11 ± 2	1 of 4	2.40	None
Male accessory glands	4 ± 1	0 of 4	1.00	None
Virgin spermatheca	7 ± 1	0 of 4	1.51	None
Mated spermatheca	4 ± 0	0 of 4	0.89	None
Adult carcass	5 ± 1	0 of 4	1.10	None
Larval CNS	2 ± 2	0 of 4	0.48	None
Larval Salivary gland	3 ± 1	0 of 4	0.79	None
Larval midgut	4 ± 2	0 of 4	1.03	None
Larval tubule	4 ± 1	0 of 4	0.90	None
Larval hindgut	5 ± 2	0 of 4	1.20	None
Larval fat body	6 ± 2	0 of 4	1.50	None
Larval trachea	4 ± 2	0 of 4	0.91	None
Larval carcass	2 ± 0	0 of 4	0.62	None
S2 cells (growing)	6 ± 1	0 of 4	1.47	None
Whole fly	4 ± 1	0 of 4

Looking for FBgn0083945. 5 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720