FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0083949 through 18771 annotations produced 4 hits

(CG34113):

Annotation Number : CG14677
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083949
Gbrowse : chr3R:1701721-1705544 (-) // 99.37 //
Probeset : 1628192_at
Accessions : protein= NP_001036681; /// NP_001036682;, nucleotide= NM_001043216; /// NM_001043217;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0083949.
VDRC has 5 RNAi stocks for FBgn0083949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	3.20	None
Head	0 ± 0	0 of 4	1.10	None
Eye	0 ± 0	0 of 4	1.14	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.80	None
Salivary gland	1 ± 0	0 of 4	5.21	Up
Crop	0 ± 0	0 of 4	2.20	None
Midgut	0 ± 0	0 of 4	2.10	None
Tubule	0 ± 0	0 of 4	2.00	None
Hindgut	0 ± 0	0 of 4	2.00	None
Heart	0 ± 0	0 of 4	2.43	None
Fat body	1 ± 0	0 of 4	3.21	Up
Ovary	0 ± 0	0 of 4	0.90	None
Testis	1 ± 0	0 of 4	3.70	None
Male accessory glands	0 ± 0	0 of 4	1.50	None
Virgin spermatheca	0 ± 0	0 of 4	1.21	None
Mated spermatheca	0 ± 0	0 of 4	1.86	None
Adult carcass	2 ± 1	0 of 4	6.10	None
Larval CNS	0 ± 0	0 of 4	1.36	None
Larval Salivary gland	0 ± 0	0 of 4	2.21	None
Larval midgut	1 ± 0	0 of 4	2.79	None
Larval tubule	0 ± 0	0 of 4	1.30	None
Larval hindgut	0 ± 0	0 of 4	0.57	None
Larval fat body	0 ± 0	0 of 4	2.20	None
Larval trachea	0 ± 0	0 of 4	1.50	None
Larval carcass	0 ± 0	0 of 4	1.71	None
S2 cells (growing)	0 ± 0	0 of 4	1.21	None
Whole fly	0 ± 0	0 of 4

(CG34113):

Annotation Number : S.C3R000261
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083949
Gbrowse : chr3R:1716137-1725821 (-) // 100.0 //
Probeset : 1631020_at
Accessions : protein= NP_001036681; /// NP_001036682;, nucleotide= NM_001043216; /// NM_001043217;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0083949.
VDRC has 5 RNAi stocks for FBgn0083949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 0	0 of 4	2.30	None
Head	7 ± 2	0 of 4	3.10	None
Eye	2 ± 0	0 of 4	1.20	None
Thoracicoabdominal ganglion	5 ± 0	0 of 4	2.50	None
Salivary gland	19 ± 3	0 of 4	8.07	Up
Crop	5 ± 1	0 of 4	2.10	None
Midgut	3 ± 1	0 of 4	1.30	None
Tubule	5 ± 0	0 of 4	2.10	Up
Hindgut	5 ± 1	0 of 4	2.50	None
Heart	2 ± 1	0 of 4	1.00	None
Fat body	6 ± 2	0 of 4	2.51	None
Ovary	3 ± 1	0 of 4	1.40	None
Testis	2 ± 1	0 of 4	1.20	None
Male accessory glands	8 ± 1	0 of 4	3.60	Up
Virgin spermatheca	4 ± 2	0 of 4	1.98	None
Mated spermatheca	8 ± 1	0 of 4	3.43	Up
Adult carcass	10 ± 1	0 of 4	4.40	Up
Larval CNS	5 ± 2	0 of 4	2.38	None
Larval Salivary gland	1 ± 0	0 of 4	0.53	None
Larval midgut	4 ± 0	0 of 4	1.78	None
Larval tubule	4 ± 3	0 of 4	2.00	None
Larval hindgut	5 ± 1	0 of 4	2.09	None
Larval fat body	6 ± 2	0 of 4	2.70	None
Larval trachea	5 ± 1	0 of 4	2.37	None
Larval carcass	4 ± 0	0 of 4	1.92	None
S2 cells (growing)	2 ± 0	0 of 4	0.96	None
Whole fly	2 ± 1	0 of 4

(CG34113):

Annotation Number : CG10989
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083949
Gbrowse : chr3R:1690870-1692736 (-) // 100.0 //
Probeset : 1639543_at
Accessions : protein= NP_001036681; /// NP_001036682;, nucleotide= NM_001043216; /// NM_001043217;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0083949.
VDRC has 5 RNAi stocks for FBgn0083949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 2	0 of 4	1.90	None
Head	1 ± 1	0 of 4	0.50	None
Eye	4 ± 1	0 of 4	1.15	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	1.10	None
Salivary gland	13 ± 7	0 of 4	3.54	None
Crop	2 ± 0	0 of 4	0.60	None
Midgut	2 ± 0	0 of 4	0.70	None
Tubule	2 ± 0	0 of 4	0.70	Down
Hindgut	1 ± 0	0 of 4	0.30	None
Heart	2 ± 0	0 of 4	0.53	None
Fat body	1 ± 0	0 of 4	0.44	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	2 ± 0	0 of 4	0.60	None
Male accessory glands	4 ± 1	0 of 4	1.00	None
Virgin spermatheca	2 ± 1	0 of 4	0.62	None
Mated spermatheca	1 ± 0	0 of 4	0.39	None
Adult carcass	3 ± 1	0 of 4	0.90	None
Larval CNS	2 ± 2	0 of 4	0.51	None
Larval Salivary gland	9 ± 3	0 of 4	2.30	None
Larval midgut	2 ± 1	0 of 4	0.67	None
Larval tubule	4 ± 1	0 of 4	1.10	None
Larval hindgut	3 ± 1	0 of 4	0.85	None
Larval fat body	6 ± 2	0 of 4	1.70	None
Larval trachea	3 ± 3	0 of 4	0.96	None
Larval carcass	2 ± 0	0 of 4	0.59	None
S2 cells (growing)	3 ± 1	0 of 4	0.80	None
Whole fly	3 ± 1	0 of 4

(CG34113):

Annotation Number : CG14678
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0083949
Gbrowse : chr3R:1710378-1713180 (-) // 100.0 //
Probeset : 1625194_at
Accessions : protein= NP_001036681; /// NP_001036682;, nucleotide= NM_001043216; /// NM_001043217;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0083949.
VDRC has 5 RNAi stocks for FBgn0083949 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	1.00	None
Head	1 ± 0	0 of 4	0.50	None
Eye	1 ± 0	0 of 4	0.43	None
Thoracicoabdominal ganglion	4 ± 2	0 of 4	1.80	None
Salivary gland	9 ± 5	0 of 4	4.02	None
Crop	10 ± 2	0 of 4	4.60	Up
Midgut	4 ± 2	0 of 4	1.70	None
Tubule	1 ± 0	0 of 4	0.60	Down
Hindgut	8 ± 1	0 of 4	3.50	Up
Heart	2 ± 1	0 of 4	1.24	None
Fat body	7 ± 4	0 of 4	3.28	None
Ovary	4 ± 0	0 of 4	1.80	None
Testis	4 ± 2	0 of 4	1.80	None
Male accessory glands	4 ± 3	0 of 4	1.90	None
Virgin spermatheca	3 ± 1	0 of 4	1.57	None
Mated spermatheca	6 ± 1	0 of 4	2.68	None
Adult carcass	12 ± 2	0 of 4	5.30	Up
Larval CNS	4 ± 2	0 of 4	2.05	None
Larval Salivary gland	1 ± 0	0 of 4	0.47	None
Larval midgut	2 ± 1	0 of 4	1.21	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	6 ± 1	0 of 4	2.74	None
Larval fat body	8 ± 2	0 of 4	3.60	None
Larval trachea	3 ± 2	0 of 4	1.27	None
Larval carcass	10 ± 1	0 of 4	4.27	Up
S2 cells (growing)	2 ± 0	0 of 4	1.14	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0083949. 4 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720