Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085205 through 18771 annotations produced 1 hits



(CG34176):

Annotation Number : CT35481
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085205
Gbrowse : chr2L:4004130-4004382 (+) // 100.0 //
Probeset : 1632575_at
Accessions : protein= NP_001097076;, nucleotide= NM_001103606;
FlyMine data for FBgn0085205.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain8 ± 10 of 4 0.00Down
Head12 ± 01 of 4 0.10Down
Eye3 ± 10 of 4 0.02Down
Thoracicoabdominal ganglion14 ± 31 of 4 0.10Down
Salivary gland237 ± 164 of 4 1.13None
Crop23 ± 30 of 4 0.10Down
Midgut2261 ± 614 of 410.80Up
Tubule16 ± 31 of 4 0.10Down
Hindgut532 ± 144 of 4 2.50Up
Heart1 ± 00 of 4 0.01Down
Fat body14 ± 80 of 4 0.07Down
Ovary6 ± 10 of 4 0.00Down
Testis39 ± 54 of 4 0.20Down
Male accessory glands22 ± 42 of 4 0.10Down
Virgin spermatheca19 ± 31 of 4 0.09Down
Mated spermatheca16 ± 22 of 4 0.08Down
Adult carcass20 ± 50 of 4 0.10Down
Larval CNS10 ± 30 of 4 0.05Down
Larval Salivary gland40 ± 130 of 4 0.19Down
Larval midgut1622 ± 794 of 4 7.72Up
Larval tubule51 ± 93 of 4 0.20Down
Larval hindgut496 ± 424 of 4 2.36Up
Larval fat body11 ± 20 of 4 0.10Down
Larval trachea2 ± 10 of 4 0.01Down
Larval carcass10 ± 20 of 4 0.05Down
S2 cells (growing)20 ± 21 of 4 0.10Down
Whole fly210 ± 364 of 4

Looking for FBgn0085205. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime