FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085207 through 18771 annotations produced 1 hits

/// (CG34177 /// CG34178):

Annotation Number : CG12677
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085206 /// FBgn0085207
Gbrowse : chr2L:4433907-4435060 (+) // 100.0 //
Probeset : 1633150_a_at
Accessions : protein= NP_001097081; /// NP_001097082; /// NP_001097083;, nucleotide= NM_001103611; /// NM_001103612; /// NM_001103613;
FlyMine data for FBgn0085206 /// FBgn0085207.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	3 of 4	0.00	Down
Head	5 ± 1	0 of 4	0.00	Down
Eye	9 ± 1	3 of 4	0.07	Down
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.10	Down
Salivary gland	13 ± 2	0 of 4	0.10	Down
Crop	8 ± 1	1 of 4	0.10	Down
Midgut	6 ± 2	0 of 4	0.10	Down
Tubule	5 ± 0	0 of 4	0.00	Down
Hindgut	5 ± 1	2 of 4	0.00	Down
Heart	5 ± 1	1 of 4	0.04	Down
Fat body	8 ± 2	3 of 4	0.06	Down
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	1301 ± 16	4 of 4	10.00	Up
Male accessory glands	13 ± 1	2 of 4	0.10	Down
Virgin spermatheca	5 ± 0	0 of 4	0.04	Down
Mated spermatheca	5 ± 1	0 of 4	0.04	Down
Adult carcass	11 ± 1	0 of 4	0.10	Down
Larval CNS	4 ± 0	0 of 4	0.03	Down
Larval Salivary gland	4 ± 1	0 of 4	0.04	Down
Larval midgut	5 ± 1	0 of 4	0.04	Down
Larval tubule	7 ± 1	2 of 4	0.10	Down
Larval hindgut	2 ± 0	0 of 4	0.02	Down
Larval fat body	153 ± 77	4 of 4	1.20	None
Larval trachea	9 ± 8	1 of 4	0.07	Down
Larval carcass	2 ± 0	0 of 4	0.02	Down
S2 cells (growing)	4 ± 1	0 of 4	0.04	Down
Whole fly	129 ± 5	4 of 4

Looking for FBgn0085207. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720