Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085241 through 18771 annotations produced 1 hits



(CG34212):

Annotation Number : S.C2R000074
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085241
Gbrowse : chr2R:1937480-1939904 (-) // 98.54 //
Probeset : 1631103_at
Accessions : protein= NP_001097196;, nucleotide= NM_001103726;
FlyMine data for FBgn0085241.
VDRC has 1 RNAi stocks for FBgn0085241 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head3 ± 10 of 4 0.40None
Eye17 ± 03 of 4 2.04Up
Thoracicoabdominal ganglion5 ± 00 of 4 0.70Down
Salivary gland87 ± 41 of 410.36Up
Crop4 ± 10 of 4 0.50None
Midgut6 ± 20 of 4 0.80None
Tubule2 ± 00 of 4 0.30Down
Hindgut2 ± 10 of 4 0.30Down
Heart5 ± 21 of 4 0.63None
Fat body1 ± 00 of 4 0.16Down
Ovary2 ± 00 of 4 0.30Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands4 ± 10 of 4 0.50None
Virgin spermatheca5 ± 20 of 4 0.62None
Mated spermatheca10 ± 10 of 4 1.18None
Adult carcass16 ± 60 of 4 1.90None
Larval CNS2 ± 10 of 4 0.29Down
Larval Salivary gland5 ± 20 of 4 0.61None
Larval midgut10 ± 20 of 4 1.20None
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut2 ± 00 of 4 0.27Down
Larval fat body1 ± 00 of 4 0.20Down
Larval trachea3 ± 40 of 4 0.42None
Larval carcass2 ± 00 of 4 0.26Down
S2 cells (growing)11 ± 10 of 4 1.37None
Whole fly8 ± 00 of 4

Looking for FBgn0085241. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime