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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085302 through 18771 annotations produced 1 hits



(CG34273):

Annotation Number : HDC13589
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085302
Gbrowse : chr3R:10342774-10343162 (+) // 100.0 //
Probeset : 1640028_at
Accessions : protein= NP_001097790;, nucleotide= NM_001104320;
FlyMine data for FBgn0085302.
VDRC has 1 RNAi stocks for FBgn0085302 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.90None
Head7 ± 00 of 4 1.20None
Eye3 ± 10 of 4 0.65None
Thoracicoabdominal ganglion6 ± 10 of 4 1.00None
Salivary gland20 ± 32 of 4 3.35Up
Crop7 ± 00 of 4 1.20None
Midgut12 ± 00 of 4 1.90Up
Tubule7 ± 10 of 4 1.20None
Hindgut9 ± 10 of 4 1.50None
Heart3 ± 00 of 4 0.64None
Fat body7 ± 01 of 4 1.24None
Ovary4 ± 00 of 4 0.80None
Testis11 ± 14 of 4 1.80None
Male accessory glands12 ± 20 of 4 2.10None
Virgin spermatheca9 ± 12 of 4 1.50None
Mated spermatheca5 ± 22 of 4 0.85None
Adult carcass11 ± 31 of 4 1.90None
Larval CNS2 ± 10 of 4 0.38None
Larval Salivary gland54 ± 184 of 4 8.92None
Larval midgut9 ± 20 of 4 1.59None
Larval tubule9 ± 00 of 4 1.50None
Larval hindgut7 ± 10 of 4 1.18None
Larval fat body11 ± 10 of 4 1.90None
Larval trachea6 ± 32 of 4 1.07None
Larval carcass10 ± 01 of 4 1.75Up
S2 cells (growing)6 ± 01 of 4 1.07None
Whole fly6 ± 10 of 4

Looking for FBgn0085302. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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