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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085305 through 18771 annotations produced 1 hits



(CG34276):

Annotation Number : CG5470
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085305
Gbrowse : chr3R:11752076-11752333 (+) // 100.0 //
Probeset : 1632518_at
Accessions : protein= NP_001097810;, nucleotide= NM_001104340;
Interpro : 0004867 // serine-type endopeptidase inhibitor activity // inferred from electronic annotation
FlyMine data for FBgn0085305.
VDRC has 1 RNAi stocks for FBgn0085305 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 01 of 4 0.50None
Head7 ± 21 of 4 0.70None
Eye3 ± 00 of 4 0.28None
Thoracicoabdominal ganglion4 ± 10 of 4 0.40None
Salivary gland72 ± 54 of 4 6.71Up
Crop9 ± 11 of 4 0.90None
Midgut8 ± 11 of 4 0.80None
Tubule6 ± 00 of 4 0.60Down
Hindgut5 ± 11 of 4 0.50None
Heart4 ± 00 of 4 0.45None
Fat body14 ± 23 of 4 1.38None
Ovary6 ± 03 of 4 0.60None
Testis3 ± 01 of 4 0.30None
Male accessory glands6 ± 21 of 4 0.60None
Virgin spermatheca11 ± 02 of 4 1.04None
Mated spermatheca8 ± 01 of 4 0.78None
Adult carcass16 ± 33 of 4 1.60None
Larval CNS9 ± 14 of 4 0.88None
Larval Salivary gland2162 ± 784 of 4201.15Up
Larval midgut5 ± 20 of 4 0.48None
Larval tubule9 ± 11 of 4 0.80None
Larval hindgut8 ± 22 of 4 0.82None
Larval fat body6 ± 10 of 4 0.60None
Larval trachea6 ± 23 of 4 0.62None
Larval carcass9 ± 02 of 4 0.88None
S2 cells (growing)4 ± 11 of 4 0.39None
Whole fly10 ± 33 of 4

Looking for FBgn0085305. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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