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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085324 through 18771 annotations produced 1 hits



(CG34295):

Annotation Number : S.C3R003279
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085324
Gbrowse : chr3R:24615338-24616017 (+) // 100.0 //
Probeset : 1630061_at
Accessions : protein= NP_001097956;, nucleotide= NM_001104486;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0085324.
VDRC has 1 RNAi stocks for FBgn0085324 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.30None
Head1 ± 00 of 4 0.30None
Eye1 ± 00 of 4 0.42None
Thoracicoabdominal ganglion1 ± 00 of 4 0.20None
Salivary gland5 ± 30 of 4 1.13None
Crop3 ± 10 of 4 0.70None
Midgut2 ± 10 of 4 0.60None
Tubule4 ± 10 of 4 1.00None
Hindgut2 ± 00 of 4 0.60None
Heart0 ± 00 of 4 0.15None
Fat body1 ± 00 of 4 0.25None
Ovary2 ± 00 of 4 0.50None
Testis1 ± 00 of 4 0.30None
Male accessory glands326 ± 294 of 471.30Up
Virgin spermatheca1 ± 00 of 4 0.31None
Mated spermatheca0 ± 00 of 4 0.20None
Adult carcass2 ± 00 of 4 0.50None
Larval CNS0 ± 00 of 4 0.17None
Larval Salivary gland3 ± 10 of 4 0.66None
Larval midgut1 ± 00 of 4 0.36None
Larval tubule3 ± 00 of 4 0.80None
Larval hindgut2 ± 10 of 4 0.52None
Larval fat body1 ± 00 of 4 0.40None
Larval trachea0 ± 00 of 4 0.09Down
Larval carcass2 ± 00 of 4 0.44None
S2 cells (growing)1 ± 00 of 4 0.22None
Whole fly4 ± 10 of 4

Looking for FBgn0085324. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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