FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085329 through 18771 annotations produced 1 hits

(CG34300):

Annotation Number : S.C3R003514
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085329
Gbrowse : chr3R:26130343-26132362 (-) // 100.0 //
Probeset : 1635122_at
Accessions : protein= NP_001097980;, nucleotide= NM_001104510;
FlyMine data for FBgn0085329.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	Down
Head	2 ± 1	0 of 4	0.20	Down
Eye	0 ± 0	0 of 4	0.04	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.10	Down
Salivary gland	15 ± 5	0 of 4	1.55	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.20	Down
Heart	1 ± 0	0 of 4	0.13	Down
Fat body	2 ± 1	0 of 4	0.27	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	62 ± 7	4 of 4	6.40	Up
Male accessory glands	3 ± 1	0 of 4	0.40	Down
Virgin spermatheca	2 ± 0	0 of 4	0.27	Down
Mated spermatheca	0 ± 0	0 of 4	0.09	Down
Adult carcass	1 ± 0	0 of 4	0.20	Down
Larval CNS	0 ± 0	0 of 4	0.07	Down
Larval Salivary gland	2 ± 0	0 of 4	0.21	Down
Larval midgut	1 ± 0	0 of 4	0.13	Down
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	0 ± 0	0 of 4	0.08	Down
Larval fat body	27 ± 8	1 of 4	2.80	None
Larval trachea	2 ± 1	0 of 4	0.28	Down
Larval carcass	0 ± 0	0 of 4	0.08	Down
S2 cells (growing)	0 ± 0	0 of 4	0.10	Down
Whole fly	9 ± 1	0 of 4

Looking for FBgn0085329. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720