FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085340 through 18771 annotations produced 1 hits

():

Annotation Number : S.CX002319
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085340
Gbrowse : chrX:20254459-20258374 (-) // 100.0 //
Probeset : 1634745_at
Accessions : protein= , nucleotide=
FlyMine data for FBgn0085340.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.50	None
Head	4 ± 0	0 of 4	1.70	None
Eye	3 ± 0	0 of 4	1.36	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.40	None
Salivary gland	12 ± 3	2 of 4	4.76	None
Crop	7 ± 2	3 of 4	2.80	None
Midgut	5 ± 0	0 of 4	2.20	Up
Tubule	5 ± 0	1 of 4	2.30	Up
Hindgut	3 ± 1	0 of 4	1.50	None
Heart	2 ± 0	1 of 4	1.06	None
Fat body	6 ± 0	1 of 4	2.50	Up
Ovary	2 ± 0	0 of 4	1.00	None
Testis	3 ± 0	0 of 4	1.20	None
Male accessory glands	7 ± 3	0 of 4	2.80	None
Virgin spermatheca	3 ± 0	0 of 4	1.50	None
Mated spermatheca	5 ± 1	2 of 4	1.99	None
Adult carcass	7 ± 1	0 of 4	3.00	Up
Larval CNS	3 ± 1	2 of 4	1.36	None
Larval Salivary gland	5 ± 0	1 of 4	1.98	None
Larval midgut	6 ± 1	2 of 4	2.32	Up
Larval tubule	5 ± 0	1 of 4	2.20	Up
Larval hindgut	3 ± 1	3 of 4	1.50	None
Larval fat body	7 ± 1	0 of 4	2.90	Up
Larval trachea	2 ± 2	0 of 4	0.89	None
Larval carcass	2 ± 0	0 of 4	1.05	None
S2 cells (growing)	2 ± 1	1 of 4	0.99	None
Whole fly	2 ± 0	0 of 4

Looking for FBgn0085340. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720