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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085370 through 18771 annotations produced 1 hits



Phosphodiesterase 11 (Pde11):

Annotation Number : CG10231
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085370
Gbrowse : chr2L:18532727-18563172 (-) // 100.0 //
Probeset : 1639582_at
Accessions : protein= NP_001097177; /// NP_609885;, nucleotide= NM_001103707; /// NM_136041;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004114 // 3'
FlyMine data for FBgn0085370.
Homophila reports that CG10231 is a close match (1e-18) to human gene PDE8B;PPNAD3 (NP_001025025), a gene associated with Pigmented nodular adrenocortical disease, primary, 3 (3).
BioGrid reports that CG10231 interacts with CG17666 CG17826 CG4804 CG6864 CG8942 .
TRiP has 1 RNAi stocks for FBgn0085370 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085370 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain268 94 of 4 2.50Up
Head132 104 of 4 1.20None
Eye327 374 of 4 3.09Up
Thoracicoabdominal ganglion154 114 of 4 1.50Up
Salivary gland268 14 of 4 2.53Up
Crop176 74 of 4 1.70Up
Midgut188 84 of 4 1.80Up
Tubule161 74 of 4 1.50Up
Hindgut285 114 of 4 2.70Up
Heart332 134 of 4 3.14Up
Fat body98 74 of 4 0.92None
Ovary192 24 of 4 1.80Up
Testis39 24 of 4 0.40Down
Male accessory glands77 44 of 4 0.70None
Virgin spermatheca105 104 of 4 0.99None
Mated spermatheca110 74 of 4 1.04None
Adult carcass102 84 of 4 1.00None
Larval CNS79 24 of 4 0.75None
Larval Salivary gland176 134 of 4 1.66Up
Larval midgut91 84 of 4 0.86None
Larval tubule180 74 of 4 1.70Up
Larval hindgut172 94 of 4 1.63Up
Larval fat body73 44 of 4 0.70None
Larval trachea156 164 of 4 1.48Up
Larval carcass77 94 of 4 0.73None
S2 cells (growing)245 94 of 4 2.31Up
Whole fly106 114 of 4

Looking for FBgn0085370. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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