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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085380 through 18771 annotations produced 2 hits



CG11928 (CG34351):

Annotation Number : CG11928
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085380
Gbrowse : chr2L:4719611-4720453 (+) // 100.0 //
Probeset : 1626211_at
Accessions : protein= NP_001097085;, nucleotide= NM_001103615;
FlyMine data for FBgn0085380.
VDRC has 3 RNAi stocks for FBgn0085380 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain42 ± 24 of 415.20Up
Head13 ± 13 of 4 4.80Up
Eye4 ± 11 of 4 1.45None
Thoracicoabdominal ganglion15 ± 12 of 4 5.30Up
Salivary gland15 ± 50 of 4 5.67None
Crop11 ± 12 of 4 4.00Up
Midgut4 ± 10 of 4 1.60None
Tubule4 ± 00 of 4 1.60None
Hindgut1 ± 00 of 4 0.60None
Heart5 ± 11 of 4 2.12None
Fat body4 ± 30 of 4 1.63None
Ovary2 ± 00 of 4 0.90None
Testis1 ± 00 of 4 0.40None
Male accessory glands8 ± 50 of 4 2.90None
Virgin spermatheca5 ± 10 of 4 1.91None
Mated spermatheca2 ± 00 of 4 0.85None
Adult carcass2 ± 00 of 4 0.70None
Larval CNS7 ± 10 of 4 2.52Up
Larval Salivary gland4 ± 10 of 4 1.68None
Larval midgut7 ± 20 of 4 2.75None
Larval tubule2 ± 10 of 4 1.00None
Larval hindgut4 ± 10 of 4 1.42None
Larval fat body2 ± 10 of 4 0.80None
Larval trachea4 ± 21 of 4 1.61None
Larval carcass8 ± 10 of 4 3.08Up
S2 cells (growing)8 ± 20 of 4 3.12None
Whole fly2 ± 00 of 4



CG11928 (CG34351):

Annotation Number : CG15633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085380
Gbrowse : chr2L:4711937-4712459 (+) // 100.0 //
Probeset : 1627791_at
Accessions : protein= NP_001097085;, nucleotide= NM_001103615;
FlyMine data for FBgn0085380.
VDRC has 3 RNAi stocks for FBgn0085380 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain23 ± 24 of 4 7.10Up
Head8 ± 10 of 4 2.60Up
Eye1 ± 00 of 4 0.47None
Thoracicoabdominal ganglion11 ± 11 of 4 3.30Up
Salivary gland8 ± 30 of 4 2.69None
Crop9 ± 00 of 4 2.90Up
Midgut8 ± 21 of 4 2.50None
Tubule4 ± 00 of 4 1.40Up
Hindgut7 ± 20 of 4 2.20None
Heart3 ± 10 of 4 1.11None
Fat body4 ± 00 of 4 1.33None
Ovary3 ± 00 of 4 0.90None
Testis2 ± 00 of 4 0.70None
Male accessory glands8 ± 30 of 4 2.50None
Virgin spermatheca6 ± 30 of 4 1.93None
Mated spermatheca8 ± 10 of 4 2.54Up
Adult carcass10 ± 00 of 4 3.20Up
Larval CNS5 ± 00 of 4 1.55None
Larval Salivary gland5 ± 10 of 4 1.77None
Larval midgut7 ± 20 of 4 2.23None
Larval tubule7 ± 10 of 4 2.10None
Larval hindgut4 ± 10 of 4 1.45None
Larval fat body7 ± 30 of 4 2.30None
Larval trachea3 ± 20 of 4 1.02None
Larval carcass5 ± 10 of 4 1.65None
S2 cells (growing)6 ± 10 of 4 1.89None
Whole fly3 ± 10 of 4

Looking for FBgn0085380. 2 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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