FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085383 through 18771 annotations produced 3 hits

CG12425 (CG34354):

Annotation Number : CG12852
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085383
Gbrowse : chr3R:24063508-24063853 (+) // 100.0 //
Probeset : 1631851_at
Accessions : protein= NP_001097953; /// NP_001163755; /// NP_001163756;, nucleotide= NM_001104483; /// NM_001170284; /// NM_001170285;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0085383.
TRiP has 2 RNAi stocks for FBgn0085383 available for purchase.
VDRC has 3 RNAi stocks for FBgn0085383 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	61 ± 1	4 of 4	7.50	Up
Head	12 ± 2	3 of 4	1.50	None
Eye	13 ± 0	4 of 4	1.66	Up
Thoracicoabdominal ganglion	72 ± 15	4 of 4	8.70	Up
Salivary gland	27 ± 9	0 of 4	3.35	None
Crop	9 ± 1	0 of 4	1.20	None
Midgut	11 ± 2	3 of 4	1.40	None
Tubule	5 ± 1	0 of 4	0.70	Down
Hindgut	10 ± 0	1 of 4	1.30	None
Heart	5 ± 0	0 of 4	0.69	None
Fat body	8 ± 3	0 of 4	1.02	None
Ovary	5 ± 1	0 of 4	0.70	None
Testis	8 ± 1	1 of 4	1.00	None
Male accessory glands	21 ± 4	0 of 4	2.60	Up
Virgin spermatheca	11 ± 0	0 of 4	1.37	None
Mated spermatheca	8 ± 0	2 of 4	1.02	None
Adult carcass	13 ± 2	0 of 4	1.60	None
Larval CNS	17 ± 2	4 of 4	2.15	Up
Larval Salivary gland	20 ± 1	2 of 4	2.43	Up
Larval midgut	8 ± 3	0 of 4	1.05	None
Larval tubule	9 ± 1	0 of 4	1.10	None
Larval hindgut	7 ± 0	1 of 4	0.92	None
Larval fat body	11 ± 2	0 of 4	1.40	None
Larval trachea	7 ± 1	0 of 4	0.95	None
Larval carcass	12 ± 0	1 of 4	1.54	Up
S2 cells (growing)	10 ± 0	3 of 4	1.25	None
Whole fly	8 ± 1	2 of 4

CG12425 (CG34354):

Annotation Number : CG4787
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085383
Gbrowse : chr3R:24060820-24063107 (+) // 100.0 //
Probeset : 1632388_at
Accessions : protein= NP_001097953; /// NP_001163755; /// NP_001163756;, nucleotide= NM_001104483; /// NM_001170284; /// NM_001170285;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0085383.
TRiP has 2 RNAi stocks for FBgn0085383 available for purchase.
VDRC has 3 RNAi stocks for FBgn0085383 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 1	4 of 4	9.00	Up
Head	1 ± 0	0 of 4	0.90	None
Eye	1 ± 0	0 of 4	0.90	None
Thoracicoabdominal ganglion	17 ± 5	3 of 4	11.10	None
Salivary gland	3 ± 0	0 of 4	1.94	None
Crop	2 ± 0	0 of 4	1.70	None
Midgut	1 ± 0	0 of 4	1.00	None
Tubule	3 ± 0	0 of 4	2.30	Up
Hindgut	3 ± 1	0 of 4	2.40	None
Heart	2 ± 0	0 of 4	1.60	None
Fat body	4 ± 4	0 of 4	2.85	None
Ovary	1 ± 0	0 of 4	0.80	None
Testis	1 ± 0	0 of 4	0.80	None
Male accessory glands	1 ± 0	0 of 4	1.00	None
Virgin spermatheca	3 ± 1	0 of 4	2.00	None
Mated spermatheca	2 ± 1	0 of 4	1.85	None
Adult carcass	1 ± 0	0 of 4	1.00	None
Larval CNS	4 ± 1	0 of 4	2.58	Up
Larval Salivary gland	5 ± 2	1 of 4	3.47	None
Larval midgut	3 ± 1	0 of 4	2.27	None
Larval tubule	0 ± 0	0 of 4	0.40	None
Larval hindgut	1 ± 0	0 of 4	1.08	None
Larval fat body	3 ± 1	0 of 4	2.20	None
Larval trachea	5 ± 3	0 of 4	3.34	None
Larval carcass	1 ± 0	0 of 4	1.06	None
S2 cells (growing)	1 ± 0	0 of 4	0.68	None
Whole fly	1 ± 0	0 of 4

CG12425 (CG34354):

Annotation Number : CG12425
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085383
Gbrowse : chr3R:23972545-23974101 (+) // 100.0 //
Probeset : 1636439_at
Accessions : protein= NP_001097953; /// NP_001163755; /// NP_001163756;, nucleotide= NM_001104483; /// NM_001170284; /// NM_001170285;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0085383.
TRiP has 2 RNAi stocks for FBgn0085383 available for purchase.
VDRC has 3 RNAi stocks for FBgn0085383 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	33 ± 3	4 of 4	12.70	Up
Head	2 ± 0	0 of 4	1.00	None
Eye	6 ± 2	0 of 4	2.37	None
Thoracicoabdominal ganglion	32 ± 4	3 of 4	12.00	Up
Salivary gland	6 ± 1	0 of 4	2.43	None
Crop	3 ± 1	0 of 4	1.20	None
Midgut	2 ± 0	0 of 4	0.80	None
Tubule	3 ± 0	0 of 4	1.20	None
Hindgut	4 ± 2	0 of 4	1.60	None
Heart	0 ± 0	0 of 4	0.30	None
Fat body	3 ± 1	0 of 4	1.16	None
Ovary	3 ± 1	0 of 4	1.30	None
Testis	7 ± 1	0 of 4	2.80	None
Male accessory glands	4 ± 1	0 of 4	1.60	None
Virgin spermatheca	1 ± 0	0 of 4	0.58	None
Mated spermatheca	2 ± 0	0 of 4	1.07	None
Adult carcass	5 ± 0	0 of 4	1.90	None
Larval CNS	7 ± 1	1 of 4	2.93	Up
Larval Salivary gland	2 ± 0	0 of 4	0.78	None
Larval midgut	8 ± 1	0 of 4	3.28	None
Larval tubule	4 ± 2	0 of 4	1.80	None
Larval hindgut	3 ± 0	0 of 4	1.37	None
Larval fat body	9 ± 3	0 of 4	3.40	None
Larval trachea	2 ± 2	0 of 4	0.80	None
Larval carcass	7 ± 2	0 of 4	2.66	None
S2 cells (growing)	1 ± 0	0 of 4	0.56	None
Whole fly	2 ± 1	0 of 4

Looking for FBgn0085383. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720