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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085384 through 18771 annotations produced 2 hits



CG12492 (CG34355):

Annotation Number : CG12492
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085384
Gbrowse : chr3R:19671127-19675071 (+) // 100.0 //
Probeset : 1636063_at
Accessions : protein= NP_001097889; /// NP_001138104;, nucleotide= NM_001104419; /// NM_001144632;
Interpro : 0004500 // dopamine beta-monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0085384.
BioGrid reports that CG12492 interacts with CG17370 CG12932 CG4220 .
VDRC has 2 RNAi stocks for FBgn0085384 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain40 ± 14 of 4 6.20Up
Head17 ± 33 of 4 2.60None
Eye6 ± 10 of 4 0.98None
Thoracicoabdominal ganglion30 ± 24 of 4 4.70Up
Salivary gland1 ± 00 of 4 0.27None
Crop3 ± 20 of 4 0.60None
Midgut1 ± 00 of 4 0.20None
Tubule1 ± 00 of 4 0.20Down
Hindgut8 ± 00 of 4 1.30None
Heart2 ± 00 of 4 0.44None
Fat body2 ± 00 of 4 0.30None
Ovary0 ± 00 of 4 0.10None
Testis12 ± 01 of 4 2.00Up
Male accessory glands4 ± 10 of 4 0.60None
Virgin spermatheca2 ± 10 of 4 0.42None
Mated spermatheca2 ± 10 of 4 0.39None
Adult carcass12 ± 20 of 4 1.90None
Larval CNS6 ± 10 of 4 1.03None
Larval Salivary gland4 ± 10 of 4 0.66None
Larval midgut2 ± 00 of 4 0.38None
Larval tubule2 ± 10 of 4 0.40None
Larval hindgut4 ± 00 of 4 0.75None
Larval fat body4 ± 20 of 4 0.70None
Larval trachea1 ± 00 of 4 0.16None
Larval carcass6 ± 10 of 4 0.95None
S2 cells (growing)2 ± 00 of 4 0.36None
Whole fly6 ± 10 of 4



CG12492 (CG34355):

Annotation Number : CT33317
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085384
Gbrowse : chr3R:19655542-19656055 (+) // 100.0 //
Probeset : 1628386_at
Accessions : protein= NP_001097889; /// NP_001138104;, nucleotide= NM_001104419; /// NM_001144632;
Interpro : 0004500 // dopamine beta-monooxygenase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0085384.
VDRC has 2 RNAi stocks for FBgn0085384 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 ± 24 of 4 5.00Up
Head8 ± 00 of 4 2.40Up
Eye6 ± 01 of 4 1.82None
Thoracicoabdominal ganglion13 ± 12 of 4 3.60Up
Salivary gland7 ± 30 of 4 1.90None
Crop6 ± 10 of 4 1.80None
Midgut6 ± 20 of 4 1.80None
Tubule6 ± 10 of 4 1.70None
Hindgut6 ± 20 of 4 1.80None
Heart2 ± 00 of 4 0.56None
Fat body6 ± 30 of 4 1.86None
Ovary2 ± 00 of 4 0.60None
Testis2 ± 00 of 4 0.70None
Male accessory glands2 ± 10 of 4 0.80None
Virgin spermatheca6 ± 00 of 4 1.73None
Mated spermatheca3 ± 10 of 4 1.03None
Adult carcass7 ± 10 of 4 2.00None
Larval CNS9 ± 11 of 4 2.44Up
Larval Salivary gland9 ± 00 of 4 2.47Up
Larval midgut6 ± 20 of 4 1.83None
Larval tubule5 ± 11 of 4 1.60None
Larval hindgut8 ± 00 of 4 2.21Up
Larval fat body6 ± 10 of 4 1.60None
Larval trachea3 ± 21 of 4 0.86None
Larval carcass1 ± 00 of 4 0.52None
S2 cells (growing)5 ± 10 of 4 1.44None
Whole fly3 ± 10 of 4

Looking for FBgn0085384. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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