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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085390 through 18771 annotations produced 2 hits



Diacyl glycerol kinase (Dgk):

Annotation Number : CG18654
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085390
Gbrowse : chr2R:3723746-3738735 (-) // 100.0 //
Probeset : 1632797_a_at
Accessions : protein= NP_001097219; /// NP_001097220; /// NP_523654; /// NP_995775;, nucleotide= NM_001103749; /// NM_001103750; /// NM_078930; /// NM_206053;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085390.
TRiP has 3 RNAi stocks for FBgn0085390 available for purchase.
VDRC has 3 RNAi stocks for FBgn0085390 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain33 14 of 4 1.80Up
Head6 10 of 4 0.30Down
Eye0 00 of 4 0.03Down
Thoracicoabdominal ganglion19 53 of 4 1.00None
Salivary gland4 20 of 4 0.23Down
Crop0 00 of 4 0.00Down
Midgut8 10 of 4 0.50Down
Tubule29 54 of 4 1.60None
Hindgut7 10 of 4 0.40Down
Heart3 10 of 4 0.19Down
Fat body2 30 of 4 0.13Down
Ovary1 00 of 4 0.10Down
Testis162 84 of 4 8.60Up
Male accessory glands36 14 of 4 1.90Up
Virgin spermatheca5 10 of 4 0.29Down
Mated spermatheca5 00 of 4 0.27Down
Adult carcass6 31 of 4 0.40Down
Larval CNS8 42 of 4 0.45Down
Larval Salivary gland0 00 of 4 0.02Down
Larval midgut2 10 of 4 0.16Down
Larval tubule15 04 of 4 0.80None
Larval hindgut3 00 of 4 0.16Down
Larval fat body28 101 of 4 1.50None
Larval trachea1 10 of 4 0.10Down
Larval carcass5 20 of 4 0.29Down
S2 cells (growing)10 13 of 4 0.55Down
Whole fly18 14 of 4



Diacyl glycerol kinase (Dgk):

Annotation Number : CG12820
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085390
Gbrowse : chr2R:3740899-3742246 (-) // 100.0 //
Probeset : 1632205_at
Accessions : protein= NP_001097219; /// NP_001097220; /// NP_523654; /// NP_995775;, nucleotide= NM_001103749; /// NM_001103750; /// NM_078930; /// NM_206053;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085390.
TRiP has 3 RNAi stocks for FBgn0085390 available for purchase.
VDRC has 3 RNAi stocks for FBgn0085390 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 00 of 4 5.40Up
Head1 00 of 4 1.40None
Eye0 00 of 4 0.55None
Thoracicoabdominal ganglion3 10 of 4 2.40None
Salivary gland5 00 of 4 4.08Up
Crop2 10 of 4 2.20None
Midgut1 00 of 4 1.40None
Tubule9 10 of 4 7.10Up
Hindgut3 10 of 4 3.10None
Heart5 00 of 4 4.10Up
Fat body2 10 of 4 1.78None
Ovary1 00 of 4 1.10None
Testis2 00 of 4 2.30Up
Male accessory glands51 104 of 440.10Up
Virgin spermatheca1 00 of 4 1.10None
Mated spermatheca1 00 of 4 1.24None
Adult carcass1 00 of 4 1.40None
Larval CNS2 10 of 4 1.63None
Larval Salivary gland6 00 of 4 4.75Up
Larval midgut4 10 of 4 3.73None
Larval tubule13 00 of 410.70Up
Larval hindgut1 00 of 4 1.10None
Larval fat body2 00 of 4 2.10None
Larval trachea1 00 of 4 0.88None
Larval carcass3 00 of 4 2.43None
S2 cells (growing)1 00 of 4 0.88None
Whole fly1 00 of 4

Looking for FBgn0085390. 2 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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