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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085411 through 18771 annotations produced 2 hits



CG14165 (CG34382):

Annotation Number : CG14166
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085411
Gbrowse : chr3L:9872639-9873873 (+) // 100.0 //
Probeset : 1630425_at
Accessions : protein= NP_001097565;, nucleotide= NM_001104095;
FlyMine data for FBgn0085411.
VDRC has 4 RNAi stocks for FBgn0085411 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 2.00None
Head1 ± 00 of 4 1.10None
Eye2 ± 10 of 4 2.38None
Thoracicoabdominal ganglion3 ± 00 of 4 3.10None
Salivary gland5 ± 20 of 4 4.98None
Crop0 ± 00 of 4 0.60None
Midgut1 ± 00 of 4 1.00None
Tubule1 ± 00 of 4 1.40Up
Hindgut1 ± 00 of 4 1.70None
Heart0 ± 00 of 4 0.95None
Fat body1 ± 10 of 4 1.70None
Ovary0 ± 00 of 4 0.80None
Testis1 ± 00 of 4 1.00None
Male accessory glands1 ± 00 of 4 1.80None
Virgin spermatheca2 ± 10 of 4 2.55None
Mated spermatheca0 ± 00 of 4 0.78None
Adult carcass1 ± 00 of 4 1.50None
Larval CNS2 ± 20 of 4 2.45None
Larval Salivary gland2 ± 10 of 4 1.95None
Larval midgut2 ± 20 of 4 2.80None
Larval tubule3 ± 20 of 4 3.60None
Larval hindgut0 ± 00 of 4 0.63None
Larval fat body1 ± 00 of 4 1.70None
Larval trachea0 ± 00 of 4 0.47None
Larval carcass1 ± 00 of 4 1.02None
S2 cells (growing)0 ± 00 of 4 0.93None
Whole fly1 ± 00 of 4



CG14165 (CG34382):

Annotation Number : CG14165
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085411
Gbrowse : chr3L:9875431-9877475 (+) // 100.0 //
Probeset : 1634847_at
Accessions : protein= NP_001097565;, nucleotide= NM_001104095;
FlyMine data for FBgn0085411.
VDRC has 4 RNAi stocks for FBgn0085411 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.60None
Head5 ± 20 of 4 2.40None
Eye3 ± 10 of 4 1.59None
Thoracicoabdominal ganglion3 ± 10 of 4 1.40None
Salivary gland4 ± 00 of 4 1.90None
Crop3 ± 00 of 4 1.50None
Midgut3 ± 10 of 4 1.70None
Tubule4 ± 00 of 4 2.10Up
Hindgut2 ± 00 of 4 1.20None
Heart1 ± 00 of 4 0.86None
Fat body1 ± 10 of 4 0.75None
Ovary1 ± 00 of 4 0.50None
Testis5 ± 00 of 4 2.30Up
Male accessory glands6 ± 20 of 4 3.10None
Virgin spermatheca1 ± 00 of 4 0.60None
Mated spermatheca1 ± 00 of 4 0.82None
Adult carcass2 ± 00 of 4 1.10None
Larval CNS3 ± 20 of 4 1.40None
Larval Salivary gland3 ± 00 of 4 1.44None
Larval midgut1 ± 00 of 4 0.72None
Larval tubule3 ± 00 of 4 1.50None
Larval hindgut2 ± 00 of 4 1.05None
Larval fat body2 ± 00 of 4 1.30None
Larval trachea4 ± 10 of 4 1.89None
Larval carcass5 ± 10 of 4 2.40None
S2 cells (growing)3 ± 10 of 4 1.63None
Whole fly2 ± 00 of 4

Looking for FBgn0085411. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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