FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085413 through 18771 annotations produced 4 hits

CG14462 (CG34384):

Annotation Number : Stencil:3R:3641397:3646933:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085413
Gbrowse : chr3R:3641382-3646918 (+) // 100.0 //
Probeset : 1639343_at
Accessions : protein= NP_001097704; /// NP_731190;, nucleotide= NM_001104234; /// NM_169197; /// NM_169197;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085413.
VDRC has 6 RNAi stocks for FBgn0085413 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	3.30	None
Head	2 ± 0	0 of 4	1.90	None
Eye	0 ± 0	0 of 4	0.72	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	1.90	None
Salivary gland	7 ± 3	0 of 4	5.80	None
Crop	3 ± 1	0 of 4	3.00	None
Midgut	1 ± 0	0 of 4	1.20	None
Tubule	2 ± 0	0 of 4	2.20	Up
Hindgut	3 ± 1	0 of 4	2.60	None
Heart	0 ± 0	0 of 4	0.76	None
Fat body	4 ± 1	0 of 4	3.28	Up
Ovary	0 ± 0	0 of 4	0.50	None
Testis	5 ± 1	0 of 4	4.00	None
Male accessory glands	2 ± 0	0 of 4	1.80	None
Virgin spermatheca	4 ± 0	0 of 4	3.94	Up
Mated spermatheca	5 ± 1	0 of 4	4.32	Up
Adult carcass	4 ± 2	0 of 4	3.20	None
Larval CNS	5 ± 1	0 of 4	4.78	Up
Larval Salivary gland	2 ± 1	0 of 4	2.30	None
Larval midgut	5 ± 0	0 of 4	4.56	Up
Larval tubule	3 ± 0	0 of 4	2.40	None
Larval hindgut	2 ± 1	0 of 4	2.16	None
Larval fat body	3 ± 0	0 of 4	2.50	None
Larval trachea	0 ± 0	0 of 4	0.40	None
Larval carcass	1 ± 0	0 of 4	1.20	None
S2 cells (growing)	1 ± 0	0 of 4	1.24	None
Whole fly	1 ± 0	0 of 4

CG14462 (CG34384):

Annotation Number : CG14462
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085413
Gbrowse : chr3R:3640940-3641198 (+) // 100.0 //
Probeset : 1641409_at
Accessions : protein= NP_001097704; /// NP_731190;, nucleotide= NM_001104234; /// NM_169197; /// NM_169197;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085413.
VDRC has 6 RNAi stocks for FBgn0085413 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	1.40	None
Head	2 ± 1	0 of 4	0.70	None
Eye	7 ± 2	0 of 4	1.96	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.90	None
Salivary gland	1 ± 0	0 of 4	0.48	None
Crop	1 ± 0	0 of 4	0.40	None
Midgut	4 ± 1	0 of 4	1.20	None
Tubule	4 ± 0	0 of 4	1.20	None
Hindgut	3 ± 1	0 of 4	1.00	None
Heart	1 ± 0	0 of 4	0.42	None
Fat body	2 ± 2	0 of 4	0.54	None
Ovary	0 ± 0	0 of 4	0.20	None
Testis	6 ± 0	0 of 4	1.70	None
Male accessory glands	3 ± 1	0 of 4	0.90	None
Virgin spermatheca	6 ± 1	0 of 4	1.78	None
Mated spermatheca	3 ± 0	0 of 4	1.01	None
Adult carcass	3 ± 1	0 of 4	0.90	None
Larval CNS	8 ± 1	1 of 4	2.38	Up
Larval Salivary gland	2 ± 1	0 of 4	0.66	None
Larval midgut	3 ± 1	0 of 4	0.81	None
Larval tubule	3 ± 1	0 of 4	1.00	None
Larval hindgut	5 ± 0	0 of 4	1.52	None
Larval fat body	3 ± 1	0 of 4	0.90	None
Larval trachea	2 ± 2	0 of 4	0.55	None
Larval carcass	5 ± 1	0 of 4	1.52	None
S2 cells (growing)	1 ± 0	0 of 4	0.40	None
Whole fly	3 ± 1	0 of 4

CG14462 (CG34384):

Annotation Number : HDC12360
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085413
Gbrowse : chr3R:3661964-3663093 (+) // 100.0 //
Probeset : 1627196_at
Accessions : protein= NP_001097704; /// NP_731190;, nucleotide= NM_001104234; /// NM_169197; /// NM_169197;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085413.
VDRC has 6 RNAi stocks for FBgn0085413 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	18 ± 2	4 of 4	31.10	Up
Head	5 ± 1	1 of 4	8.50	None
Eye	6 ± 1	1 of 4	11.58	Up
Thoracicoabdominal ganglion	8 ± 1	2 of 4	14.00	Up
Salivary gland	11 ± 5	0 of 4	18.71	None
Crop	1 ± 0	0 of 4	2.50	None
Midgut	1 ± 0	0 of 4	2.30	None
Tubule	3 ± 0	0 of 4	5.10	Up
Hindgut	3 ± 1	0 of 4	6.30	None
Heart	3 ± 0	0 of 4	6.25	Up
Fat body	4 ± 3	0 of 4	7.71	None
Ovary	0 ± 0	0 of 4	0.60	None
Testis	4 ± 1	0 of 4	6.90	Up
Male accessory glands	1 ± 0	0 of 4	2.00	None
Virgin spermatheca	2 ± 0	0 of 4	3.71	None
Mated spermatheca	3 ± 0	0 of 4	5.63	None
Adult carcass	3 ± 2	0 of 4	6.30	None
Larval CNS	12 ± 1	4 of 4	20.38	Up
Larval Salivary gland	2 ± 0	0 of 4	3.38	None
Larval midgut	1 ± 1	0 of 4	2.63	None
Larval tubule	2 ± 0	0 of 4	4.70	None
Larval hindgut	1 ± 0	0 of 4	2.96	None
Larval fat body	2 ± 1	0 of 4	3.80	None
Larval trachea	3 ± 1	1 of 4	6.54	Up
Larval carcass	1 ± 0	0 of 4	1.79	None
S2 cells (growing)	1 ± 0	0 of 4	2.92	None
Whole fly	0 ± 0	0 of 4

CG14462 (CG34384):

Annotation Number : CG31187
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085413
Gbrowse : chr3R:3667204-3679630 (+) // 100.0 //
Probeset : 1633890_at
Accessions : protein= NP_001097704; /// NP_731190;, nucleotide= NM_001104234; /// NM_169197; /// NM_169197;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004143 // diacylglycerol kinase activity // in
FlyMine data for FBgn0085413.
Homophila reports that CG31187 is a close match (4e-16) to human gene PKCL;PRKCH;PRKCL (NP_006246), a gene associated with {Cerebral infarction, susceptibility to}, 601367 (3).
VDRC has 6 RNAi stocks for FBgn0085413 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 5	4 of 4	19.00	Up
Head	12 ± 3	3 of 4	2.40	None
Eye	6 ± 0	1 of 4	1.29	None
Thoracicoabdominal ganglion	25 ± 6	4 of 4	5.10	None
Salivary gland	3 ± 2	0 of 4	0.76	None
Crop	1 ± 0	0 of 4	0.30	Down
Midgut	1 ± 0	0 of 4	0.30	Down
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 0	1 of 4	0.40	None
Heart	1 ± 0	0 of 4	0.23	Down
Fat body	1 ± 1	0 of 4	0.24	Down
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	80 ± 4	4 of 4	16.10	Up
Male accessory glands	4 ± 1	1 of 4	0.90	None
Virgin spermatheca	1 ± 0	0 of 4	0.28	Down
Mated spermatheca	2 ± 1	0 of 4	0.43	None
Adult carcass	3 ± 1	0 of 4	0.60	None
Larval CNS	21 ± 3	4 of 4	4.39	Up
Larval Salivary gland	0 ± 0	0 of 4	0.19	Down
Larval midgut	1 ± 0	0 of 4	0.23	Down
Larval tubule	1 ± 0	0 of 4	0.20	Down
Larval hindgut	1 ± 0	0 of 4	0.34	Down
Larval fat body	4 ± 2	1 of 4	0.80	None
Larval trachea	1 ± 1	0 of 4	0.36	Down
Larval carcass	0 ± 0	0 of 4	0.16	Down
S2 cells (growing)	0 ± 0	0 of 4	0.12	Down
Whole fly	5 ± 0	4 of 4

Looking for FBgn0085413. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720