Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085422 through 18771 annotations produced 2 hits



CG15405 (CG34393):

Annotation Number : CG8829
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085422
Gbrowse : chr2L:3184948-3185790 (-) // 100.0 //
Probeset : 1628661_at
Accessions : protein= NP_608753;, nucleotide= NM_134909;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation
FlyMine data for FBgn0085422.
VDRC has 8 RNAi stocks for FBgn0085422 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain45 ± 34 of 413.20Up
Head9 ± 12 of 4 2.90Up
Eye6 ± 11 of 4 1.75None
Thoracicoabdominal ganglion30 ± 24 of 4 8.90Up
Salivary gland6 ± 30 of 4 1.73None
Crop8 ± 11 of 4 2.40Up
Midgut9 ± 11 of 4 2.90Up
Tubule3 ± 00 of 4 1.10None
Hindgut5 ± 20 of 4 1.70None
Heart4 ± 10 of 4 1.40None
Fat body5 ± 41 of 4 1.55None
Ovary3 ± 10 of 4 0.90None
Testis2 ± 01 of 4 0.80None
Male accessory glands6 ± 10 of 4 1.80None
Virgin spermatheca4 ± 20 of 4 1.32None
Mated spermatheca5 ± 10 of 4 1.51None
Adult carcass8 ± 41 of 4 2.30None
Larval CNS11 ± 14 of 4 3.20Up
Larval Salivary gland8 ± 10 of 4 2.59Up
Larval midgut12 ± 21 of 4 3.48Up
Larval tubule6 ± 00 of 4 1.90None
Larval hindgut3 ± 10 of 4 0.91None
Larval fat body0 ± 00 of 4 0.20None
Larval trachea5 ± 31 of 4 1.64None
Larval carcass4 ± 10 of 4 1.16None
S2 cells (growing)5 ± 00 of 4 1.70None
Whole fly3 ± 10 of 4



CG15405 (CG34393):

Annotation Number : CG15405
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085422
Gbrowse : chr2L:3188536-3192886 (-) // 100.0 //
Probeset : 1634758_at
Accessions : protein= NP_608753;, nucleotide= NM_134909;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from electronic annotation
FlyMine data for FBgn0085422.
VDRC has 8 RNAi stocks for FBgn0085422 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain67 ± 34 of 4 9.40Up
Head15 ± 23 of 4 2.20Up
Eye5 ± 00 of 4 0.83None
Thoracicoabdominal ganglion46 ± 54 of 4 6.50Up
Salivary gland7 ± 40 of 4 1.10None
Crop5 ± 10 of 4 0.70None
Midgut3 ± 10 of 4 0.40Down
Tubule7 ± 00 of 4 1.00None
Hindgut6 ± 20 of 4 0.90None
Heart4 ± 10 of 4 0.56None
Fat body9 ± 30 of 4 1.36None
Ovary3 ± 00 of 4 0.50Down
Testis7 ± 00 of 4 1.00None
Male accessory glands3 ± 10 of 4 0.40Down
Virgin spermatheca7 ± 21 of 4 0.97None
Mated spermatheca11 ± 01 of 4 1.57Up
Adult carcass7 ± 20 of 4 1.10None
Larval CNS15 ± 24 of 4 2.15Up
Larval Salivary gland7 ± 20 of 4 1.07None
Larval midgut3 ± 10 of 4 0.51None
Larval tubule6 ± 10 of 4 0.90None
Larval hindgut4 ± 10 of 4 0.62None
Larval fat body6 ± 10 of 4 1.00None
Larval trachea4 ± 11 of 4 0.58Down
Larval carcass6 ± 11 of 4 0.96None
S2 cells (growing)6 ± 00 of 4 0.86None
Whole fly7 ± 00 of 4

Looking for FBgn0085422. 2 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime