FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085427 through 18771 annotations produced 3 hits

CG15867 (CG34398):

Annotation Number : CT32331
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085427
Gbrowse : chr2L:8932900-8933084 (+) // 90.2 //
Probeset : 1635127_at
Accessions : protein= NP_001097127; /// NP_001097128; /// NP_001162914;, nucleotide= NM_001103657; /// NM_001103658; /// NM_001169443;
FlyMine data for FBgn0085427.
VDRC has 7 RNAi stocks for FBgn0085427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	0 of 4	0.30	Down
Head	39 ± 2	4 of 4	1.90	Up
Eye	62 ± 7	4 of 4	3.01	Up
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.20	Down
Salivary gland	58 ± 2	1 of 4	2.80	Up
Crop	47 ± 4	4 of 4	2.30	Up
Midgut	1 ± 0	0 of 4	0.10	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	98 ± 5	4 of 4	4.70	Up
Heart	3 ± 0	0 of 4	0.15	Down
Fat body	5 ± 5	1 of 4	0.28	Down
Ovary	2 ± 1	1 of 4	0.10	Down
Testis	9 ± 1	2 of 4	0.50	Down
Male accessory glands	7 ± 1	0 of 4	0.30	Down
Virgin spermatheca	14 ± 2	2 of 4	0.67	None
Mated spermatheca	16 ± 3	2 of 4	0.78	None
Adult carcass	67 ± 4	4 of 4	3.20	Up
Larval CNS	4 ± 1	1 of 4	0.21	Down
Larval Salivary gland	130 ± 8	4 of 4	6.22	Up
Larval midgut	10 ± 4	1 of 4	0.52	None
Larval tubule	5 ± 1	0 of 4	0.20	Down
Larval hindgut	65 ± 6	4 of 4	3.13	Up
Larval fat body	3 ± 1	0 of 4	0.20	Down
Larval trachea	63 ± 5	4 of 4	3.05	Up
Larval carcass	78 ± 2	4 of 4	3.77	Up
S2 cells (growing)	8 ± 0	2 of 4	0.40	Down
Whole fly	20 ± 3	4 of 4

CG15867 (CG34398):

Annotation Number : CG9487
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085427
Gbrowse : chr2L:8922471-8931938 (+) // 100.0 //
Probeset : 1640585_at
Accessions : protein= NP_001097127; /// NP_001097128; /// NP_001162914;, nucleotide= NM_001103657; /// NM_001103658; /// NM_001169443;
FlyMine data for FBgn0085427.
VDRC has 7 RNAi stocks for FBgn0085427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 2	0 of 4	3.00	None
Head	2 ± 0	0 of 4	1.20	None
Eye	7 ± 1	0 of 4	4.17	Up
Thoracicoabdominal ganglion	3 ± 1	0 of 4	1.70	None
Salivary gland	3 ± 0	0 of 4	1.88	None
Crop	3 ± 0	0 of 4	2.10	None
Midgut	6 ± 0	0 of 4	3.30	Up
Tubule	5 ± 1	0 of 4	3.20	Up
Hindgut	9 ± 2	0 of 4	5.00	None
Heart	0 ± 0	0 of 4	0.40	None
Fat body	2 ± 0	0 of 4	1.42	None
Ovary	2 ± 1	0 of 4	1.60	None
Testis	1 ± 0	0 of 4	0.90	None
Male accessory glands	1 ± 0	0 of 4	0.80	None
Virgin spermatheca	4 ± 1	0 of 4	2.67	None
Mated spermatheca	2 ± 1	0 of 4	1.32	None
Adult carcass	7 ± 2	0 of 4	4.00	None
Larval CNS	2 ± 1	0 of 4	1.29	None
Larval Salivary gland	7 ± 2	0 of 4	4.28	None
Larval midgut	6 ± 2	0 of 4	3.65	None
Larval tubule	1 ± 0	0 of 4	0.80	None
Larval hindgut	3 ± 0	0 of 4	1.96	None
Larval fat body	2 ± 1	0 of 4	1.60	None
Larval trachea	8 ± 1	0 of 4	4.75	Up
Larval carcass	2 ± 0	0 of 4	1.11	None
S2 cells (growing)	2 ± 0	0 of 4	1.35	None
Whole fly	1 ± 0	0 of 4

CG15867 (CG34398):

Annotation Number : CG15867
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085427
Gbrowse : chr2L:8915834-8916065 (+) // 100.0 //
Probeset : 1628538_at
Accessions : protein= NP_001097127; /// NP_001097128; /// NP_001162914;, nucleotide= NM_001103657; /// NM_001103658; /// NM_001169443;
FlyMine data for FBgn0085427.
VDRC has 7 RNAi stocks for FBgn0085427 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	Down
Head	2 ± 1	0 of 4	0.40	None
Eye	3 ± 1	0 of 4	0.54	None
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.40	None
Salivary gland	7 ± 3	0 of 4	1.13	None
Crop	7 ± 2	0 of 4	1.20	None
Midgut	1 ± 0	0 of 4	0.30	Down
Tubule	5 ± 0	0 of 4	0.80	None
Hindgut	8 ± 0	0 of 4	1.40	None
Heart	0 ± 0	0 of 4	0.15	Down
Fat body	5 ± 2	0 of 4	0.80	None
Ovary	5 ± 0	0 of 4	0.80	None
Testis	3 ± 1	0 of 4	0.60	None
Male accessory glands	6 ± 2	0 of 4	1.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.13	Down
Mated spermatheca	2 ± 0	0 of 4	0.43	Down
Adult carcass	9 ± 4	0 of 4	1.60	None
Larval CNS	3 ± 2	0 of 4	0.52	None
Larval Salivary gland	7 ± 2	0 of 4	1.24	None
Larval midgut	1 ± 0	0 of 4	0.24	Down
Larval tubule	3 ± 1	0 of 4	0.60	None
Larval hindgut	3 ± 0	0 of 4	0.49	None
Larval fat body	3 ± 1	0 of 4	0.50	None
Larval trachea	5 ± 4	0 of 4	0.83	None
Larval carcass	8 ± 1	0 of 4	1.30	None
S2 cells (growing)	2 ± 0	0 of 4	0.36	Down
Whole fly	6 ± 1	0 of 4

Looking for FBgn0085427. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720