FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085428 through 18771 annotations produced 2 hits

NADPH oxidase (Nox):

Annotation Number : CG15924
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085428
Gbrowse : chr2R:12197071-12197782 (+) // 100.0 //
Probeset : 1634345_at
Accessions : protein= NP_001097336;, nucleotide= NM_001103866;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from e
FlyMine data for FBgn0085428.
TRiP has 4 RNAi stocks for FBgn0085428 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085428 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.20	Down
Head	1 ± 0	0 of 4	0.20	None
Eye	1 ± 0	0 of 4	0.23	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.90	None
Salivary gland	4 ± 1	0 of 4	0.85	None
Crop	7 ± 2	0 of 4	1.60	None
Midgut	4 ± 1	0 of 4	0.90	None
Tubule	5 ± 1	0 of 4	1.10	None
Hindgut	4 ± 1	0 of 4	0.90	None
Heart	1 ± 0	0 of 4	0.37	None
Fat body	3 ± 2	0 of 4	0.70	None
Ovary	4 ± 0	0 of 4	1.00	None
Testis	2 ± 0	0 of 4	0.40	None
Male accessory glands	3 ± 1	0 of 4	0.60	None
Virgin spermatheca	1 ± 0	0 of 4	0.26	None
Mated spermatheca	2 ± 0	0 of 4	0.56	None
Adult carcass	3 ± 2	0 of 4	0.70	None
Larval CNS	2 ± 1	0 of 4	0.50	None
Larval Salivary gland	4 ± 2	0 of 4	0.89	None
Larval midgut	3 ± 0	0 of 4	0.64	None
Larval tubule	8 ± 1	1 of 4	1.80	None
Larval hindgut	5 ± 0	0 of 4	1.19	None
Larval fat body	3 ± 1	0 of 4	0.80	None
Larval trachea	3 ± 2	0 of 4	0.76	None
Larval carcass	5 ± 2	0 of 4	1.16	None
S2 cells (growing)	4 ± 1	0 of 4	1.04	None
Whole fly	4 ± 1	0 of 4

NADPH oxidase (Nox):

Annotation Number : CG3896
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085428
Gbrowse : chr2R:12199747-12203725 (+) // 100.0 //
Probeset : 1630014_at
Accessions : protein= NP_001097336;, nucleotide= NM_001103866;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005506 // iron ion binding // inferred from electronic annotation /// 0005509 // calcium ion binding // inferred from e
FlyMine data for FBgn0085428.
Homophila reports that CG3896 is a close match (1e-22) to human gene DUOX2;THOX2 (NP_054799), a gene associated with Hypothyroidism, congenital, due to DUOX2 deficiency, 607200 (3).
TRiP has 4 RNAi stocks for FBgn0085428 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085428 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.10	Down
Head	8 ± 1	1 of 4	0.30	Down
Eye	7 ± 2	1 of 4	0.23	Down
Thoracicoabdominal ganglion	6 ± 2	0 of 4	0.20	Down
Salivary gland	7 ± 3	0 of 4	0.24	Down
Crop	2 ± 0	0 of 4	0.10	Down
Midgut	26 ± 1	4 of 4	0.80	None
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	8 ± 0	0 of 4	0.30	Down
Heart	5 ± 0	0 of 4	0.18	Down
Fat body	10 ± 2	0 of 4	0.35	Down
Ovary	52 ± 2	4 of 4	1.70	Up
Testis	3 ± 1	0 of 4	0.10	Down
Male accessory glands	5 ± 1	0 of 4	0.20	Down
Virgin spermatheca	2 ± 1	0 of 4	0.08	Down
Mated spermatheca	3 ± 1	0 of 4	0.11	Down
Adult carcass	18 ± 3	2 of 4	0.60	Down
Larval CNS	3 ± 1	0 of 4	0.10	Down
Larval Salivary gland	2 ± 0	0 of 4	0.07	Down
Larval midgut	27 ± 3	4 of 4	0.87	None
Larval tubule	6 ± 1	0 of 4	0.20	Down
Larval hindgut	9 ± 1	2 of 4	0.30	Down
Larval fat body	5 ± 2	1 of 4	0.20	Down
Larval trachea	9 ± 2	3 of 4	0.32	Down
Larval carcass	157 ± 21	4 of 4	5.10	Up
S2 cells (growing)	1 ± 0	0 of 4	0.05	Down
Whole fly	30 ± 4	4 of 4

Looking for FBgn0085428. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720