FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085431 through 18771 annotations produced 3 hits

CG17793 (CG34402):

Annotation Number : CG4940
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085431
Gbrowse : chr3R:8227516-8228602 (+) // 100.0 //
Probeset : 1633994_at
Accessions : protein= NP_001097756; /// NP_001097757; /// NP_001097758;, nucleotide= NM_001104286; /// NM_001104287; /// NM_001104288;
FlyMine data for FBgn0085431.
TRiP has 1 RNAi stocks for FBgn0085431 available for purchase.
VDRC has 6 RNAi stocks for FBgn0085431 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	125 ± 3	4 of 4	19.60	Up
Head	27 ± 2	4 of 4	4.30	Up
Eye	2 ± 1	0 of 4	0.46	None
Thoracicoabdominal ganglion	23 ± 1	4 of 4	3.70	Up
Salivary gland	7 ± 3	0 of 4	1.14	None
Crop	4 ± 1	0 of 4	0.70	None
Midgut	1 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	3 ± 1	0 of 4	0.60	None
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	2 ± 2	0 of 4	0.33	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	2 ± 1	0 of 4	0.30	Down
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	1 ± 0	0 of 4	0.27	Down
Mated spermatheca	3 ± 1	0 of 4	0.53	None
Adult carcass	19 ± 1	0 of 4	3.00	Up
Larval CNS	119 ± 12	4 of 4	18.74	Up
Larval Salivary gland	3 ± 1	0 of 4	0.51	None
Larval midgut	3 ± 1	0 of 4	0.49	None
Larval tubule	1 ± 0	0 of 4	0.20	Down
Larval hindgut	0 ± 0	0 of 4	0.14	Down
Larval fat body	3 ± 1	0 of 4	0.60	None
Larval trachea	1 ± 1	0 of 4	0.19	Down
Larval carcass	0 ± 0	0 of 4	0.13	Down
S2 cells (growing)	5 ± 1	0 of 4	0.91	None
Whole fly	6 ± 1	0 of 4

CG17793 (CG34402):

Annotation Number : CG31218
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085431
Gbrowse : chr3R:8214520-8216356 (+) // 100.0 //
Probeset : 1625575_at
Accessions : protein= NP_001097756; /// NP_001097757; /// NP_001097758;, nucleotide= NM_001104286; /// NM_001104287; /// NM_001104288;
FlyMine data for FBgn0085431.
TRiP has 1 RNAi stocks for FBgn0085431 available for purchase.
VDRC has 6 RNAi stocks for FBgn0085431 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 0	4 of 4	7.60	Up
Head	6 ± 0	0 of 4	3.30	Up
Eye	3 ± 0	0 of 4	1.72	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	2.00	None
Salivary gland	6 ± 2	0 of 4	3.27	None
Crop	1 ± 0	0 of 4	1.00	None
Midgut	5 ± 1	0 of 4	2.90	None
Tubule	2 ± 0	0 of 4	1.30	None
Hindgut	8 ± 2	0 of 4	4.30	None
Heart	3 ± 0	0 of 4	1.62	None
Fat body	4 ± 3	0 of 4	2.65	None
Ovary	1 ± 0	0 of 4	0.60	None
Testis	2 ± 0	0 of 4	1.10	None
Male accessory glands	2 ± 0	0 of 4	1.20	None
Virgin spermatheca	2 ± 1	0 of 4	1.47	None
Mated spermatheca	3 ± 1	0 of 4	1.84	None
Adult carcass	8 ± 2	0 of 4	4.70	None
Larval CNS	9 ± 6	2 of 4	4.93	None
Larval Salivary gland	2 ± 1	0 of 4	1.19	None
Larval midgut	3 ± 0	0 of 4	1.91	Up
Larval tubule	3 ± 1	0 of 4	1.60	None
Larval hindgut	3 ± 1	0 of 4	1.65	None
Larval fat body	2 ± 0	0 of 4	1.10	None
Larval trachea	0 ± 0	0 of 4	0.50	None
Larval carcass	2 ± 0	0 of 4	1.47	None
S2 cells (growing)	1 ± 0	0 of 4	0.57	None
Whole fly	1 ± 0	0 of 4

CG17793 (CG34402):

Annotation Number : CG17793
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085431
Gbrowse : chr3R:8211970-8212399 (+) // 100.0 //
Probeset : 1638243_at
Accessions : protein= NP_001097756; /// NP_001097757; /// NP_001097758;, nucleotide= NM_001104286; /// NM_001104287; /// NM_001104288;
FlyMine data for FBgn0085431.
TRiP has 1 RNAi stocks for FBgn0085431 available for purchase.
VDRC has 6 RNAi stocks for FBgn0085431 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	16 ± 1	4 of 4	9.30	Up
Head	6 ± 0	0 of 4	4.00	Up
Eye	1 ± 0	0 of 4	0.99	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	2.70	None
Salivary gland	4 ± 2	0 of 4	2.67	None
Crop	3 ± 1	0 of 4	2.10	None
Midgut	2 ± 0	0 of 4	1.20	None
Tubule	4 ± 0	0 of 4	2.60	Up
Hindgut	3 ± 0	0 of 4	2.00	None
Heart	3 ± 1	0 of 4	2.30	None
Fat body	3 ± 2	0 of 4	1.94	None
Ovary	0 ± 0	0 of 4	0.40	None
Testis	2 ± 1	0 of 4	1.70	None
Male accessory glands	9 ± 0	0 of 4	5.40	Up
Virgin spermatheca	4 ± 1	0 of 4	2.65	None
Mated spermatheca	3 ± 1	0 of 4	2.12	None
Adult carcass	6 ± 1	0 of 4	3.60	None
Larval CNS	11 ± 3	2 of 4	6.72	Up
Larval Salivary gland	4 ± 2	0 of 4	2.45	None
Larval midgut	3 ± 1	0 of 4	1.75	None
Larval tubule	5 ± 0	0 of 4	3.40	Up
Larval hindgut	3 ± 1	0 of 4	2.22	None
Larval fat body	2 ± 1	0 of 4	1.60	None
Larval trachea	1 ± 1	0 of 4	1.00	None
Larval carcass	1 ± 0	0 of 4	0.67	None
S2 cells (growing)	1 ± 0	0 of 4	0.70	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0085431. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720