FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085443 through 18771 annotations produced 4 hits

Sprint (spri):

Annotation Number : CG33175
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085443
Gbrowse : chrX:10390753-10404675 (-) // 100.0 //
Probeset : 1627037_s_at
Accessions : protein= NP_001096941; /// NP_001096944; /// NP_788896; /// NP_996401;, nucleotide= NM_001103471; /// NM_001103474; /// NM_176723; /// NM_206678;
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0085443.
BioGrid reports that CG33175 interacts with CG6254 CG8942 CG9572 CG3979 CG8556 CG5203 CG6240 .
VDRC has 9 RNAi stocks for FBgn0085443 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 0	2 of 4	1.60	Up
Head	2 ± 1	0 of 4	0.40	Down
Eye	3 ± 1	0 of 4	0.55	None
Thoracicoabdominal ganglion	8 ± 2	0 of 4	1.40	None
Salivary gland	1 ± 0	0 of 4	0.26	Down
Crop	3 ± 0	0 of 4	0.50	Down
Midgut	0 ± 0	0 of 4	0.20	Down
Tubule	0 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.20	Down
Heart	1 ± 0	0 of 4	0.19	Down
Fat body	0 ± 0	0 of 4	0.08	Down
Ovary	19 ± 1	4 of 4	3.10	Up
Testis	10 ± 1	2 of 4	1.70	None
Male accessory glands	3 ± 1	0 of 4	0.60	None
Virgin spermatheca	0 ± 0	0 of 4	0.10	Down
Mated spermatheca	0 ± 0	0 of 4	0.10	Down
Adult carcass	3 ± 1	0 of 4	0.60	None
Larval CNS	10 ± 2	3 of 4	1.77	Up
Larval Salivary gland	8 ± 1	0 of 4	1.36	None
Larval midgut	0 ± 0	0 of 4	0.10	Down
Larval tubule	5 ± 1	0 of 4	0.80	None
Larval hindgut	0 ± 0	0 of 4	0.13	Down
Larval fat body	2 ± 1	0 of 4	0.40	Down
Larval trachea	0 ± 0	0 of 4	0.10	Down
Larval carcass	1 ± 0	0 of 4	0.29	Down
S2 cells (growing)	43 ± 4	4 of 4	7.19	Up
Whole fly	6 ± 0	0 of 4

Sprint (spri):

Annotation Number : CG33175
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085443
Gbrowse : chrX:10384499-10440769 (-) // 100.0 //
Probeset : 1629648_s_at
Accessions : protein= NP_001096941; /// NP_001096944; /// NP_788896; /// NP_996401;, nucleotide= NM_001103471; /// NM_001103474; /// NM_176723; /// NM_206678;
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0085443.
BioGrid reports that CG33175 interacts with CG6254 CG8942 CG9572 CG3979 CG8556 CG5203 CG6240 .
VDRC has 9 RNAi stocks for FBgn0085443 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	71 ± 2	4 of 4	1.30	None
Head	33 ± 3	4 of 4	0.60	Down
Eye	40 ± 5	4 of 4	0.72	None
Thoracicoabdominal ganglion	50 ± 2	4 of 4	0.90	None
Salivary gland	23 ± 2	1 of 4	0.42	Down
Crop	39 ± 3	4 of 4	0.70	Down
Midgut	6 ± 1	0 of 4	0.10	Down
Tubule	291 ± 25	4 of 4	5.20	Up
Hindgut	36 ± 1	4 of 4	0.60	Down
Heart	26 ± 5	4 of 4	0.48	Down
Fat body	28 ± 9	4 of 4	0.50	Down
Ovary	125 ± 3	4 of 4	2.20	Up
Testis	47 ± 2	4 of 4	0.90	None
Male accessory glands	28 ± 5	3 of 4	0.50	Down
Virgin spermatheca	17 ± 1	4 of 4	0.32	Down
Mated spermatheca	19 ± 0	4 of 4	0.36	Down
Adult carcass	14 ± 3	1 of 4	0.30	Down
Larval CNS	85 ± 9	4 of 4	1.53	Up
Larval Salivary gland	44 ± 3	4 of 4	0.80	None
Larval midgut	15 ± 3	2 of 4	0.28	Down
Larval tubule	38 ± 0	4 of 4	0.70	Down
Larval hindgut	30 ± 3	4 of 4	0.54	Down
Larval fat body	22 ± 1	2 of 4	0.40	Down
Larval trachea	41 ± 5	4 of 4	0.74	Down
Larval carcass	24 ± 5	4 of 4	0.43	Down
S2 cells (growing)	280 ± 8	4 of 4	5.04	Up
Whole fly	55 ± 4	4 of 4

Sprint (spri):

Annotation Number : CG32674
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085443
Gbrowse : chrX:10469418-10470210 (-) // 100.0 //
Probeset : 1631646_at
Accessions : protein= NP_001096941; /// NP_001096944; /// NP_788896; /// NP_996401;, nucleotide= NM_001103471; /// NM_001103474; /// NM_176723; /// NM_206678;
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0085443.
VDRC has 9 RNAi stocks for FBgn0085443 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	13 ± 2	4 of 4	1.30	None
Head	17 ± 2	3 of 4	1.60	None
Eye	6 ± 1	1 of 4	0.59	None
Thoracicoabdominal ganglion	13 ± 1	4 of 4	1.20	None
Salivary gland	15 ± 5	1 of 4	1.37	None
Crop	7 ± 0	0 of 4	0.70	None
Midgut	8 ± 4	0 of 4	0.80	None
Tubule	7 ± 1	0 of 4	0.70	Down
Hindgut	10 ± 1	1 of 4	1.00	None
Heart	4 ± 1	1 of 4	0.37	Down
Fat body	15 ± 3	1 of 4	1.45	None
Ovary	12 ± 1	4 of 4	1.20	None
Testis	4 ± 1	0 of 4	0.40	Down
Male accessory glands	29 ± 3	4 of 4	2.70	Up
Virgin spermatheca	11 ± 0	1 of 4	1.05	None
Mated spermatheca	4 ± 1	0 of 4	0.42	None
Adult carcass	12 ± 2	0 of 4	1.20	None
Larval CNS	6 ± 3	1 of 4	0.55	None
Larval Salivary gland	10 ± 1	0 of 4	0.95	None
Larval midgut	8 ± 2	0 of 4	0.81	None
Larval tubule	7 ± 2	0 of 4	0.70	None
Larval hindgut	9 ± 2	1 of 4	0.86	None
Larval fat body	11 ± 2	0 of 4	1.00	None
Larval trachea	11 ± 4	1 of 4	1.04	None
Larval carcass	6 ± 2	1 of 4	0.62	None
S2 cells (growing)	21 ± 1	4 of 4	1.95	Up
Whole fly	11 ± 1	3 of 4

Sprint (spri):

Annotation Number : CG32680
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085443
Gbrowse : chrX:10386494-10387770 (-) // 100.0 //
Probeset : 1626771_at
Accessions : protein= NP_001096941; /// NP_001096944; /// NP_788896; /// NP_996401;, nucleotide= NM_001103471; /// NM_001103474; /// NM_176723; /// NM_206678;
Interpro : 0005096 // GTPase activator activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0085443.
VDRC has 9 RNAi stocks for FBgn0085443 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.70	None
Head	4 ± 1	0 of 4	0.90	None
Eye	1 ± 0	0 of 4	0.26	None
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.60	None
Salivary gland	3 ± 2	0 of 4	0.75	None
Crop	5 ± 1	0 of 4	1.10	None
Midgut	3 ± 1	0 of 4	0.80	None
Tubule	30 ± 4	3 of 4	6.50	Up
Hindgut	10 ± 1	1 of 4	2.30	None
Heart	3 ± 1	0 of 4	0.79	None
Fat body	9 ± 2	0 of 4	1.96	None
Ovary	2 ± 0	0 of 4	0.40	None
Testis	2 ± 1	0 of 4	0.50	None
Male accessory glands	4 ± 1	0 of 4	0.90	None
Virgin spermatheca	0 ± 0	0 of 4	0.16	None
Mated spermatheca	2 ± 0	0 of 4	0.56	None
Adult carcass	6 ± 2	0 of 4	1.40	None
Larval CNS	1 ± 1	0 of 4	0.37	None
Larval Salivary gland	3 ± 2	1 of 4	0.77	None
Larval midgut	2 ± 1	0 of 4	0.61	None
Larval tubule	9 ± 0	2 of 4	2.10	None
Larval hindgut	3 ± 1	1 of 4	0.63	None
Larval fat body	1 ± 0	0 of 4	0.40	None
Larval trachea	1 ± 0	0 of 4	0.24	None
Larval carcass	2 ± 0	0 of 4	0.52	None
S2 cells (growing)	132 ± 9	4 of 4	28.08	Up
Whole fly	4 ± 2	0 of 4

Looking for FBgn0085443. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720