Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085450 through 18771 annotations produced 3 hits



Sno-oncogene (Snoo):

Annotation Number : CG7233
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085450
Gbrowse : chr2L:7975173-7976190 (-) // 100.0 //
Probeset : 1641036_at
Accessions : protein= NP_001097115; /// NP_001097116; /// NP_001097117; /// NP_001097118; /// NP_001097119;, nucleotide= NM_001103645; /// NM_001103646; /// NM_001103647; /// NM_001103648; /// NM_001103649;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0085450.
TRiP has 1 RNAi stocks for FBgn0085450 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085450 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 04 of 4 1.80Up
Head8 30 of 4 0.80None
Eye2 00 of 4 0.22Down
Thoracicoabdominal ganglion13 03 of 4 1.30None
Salivary gland12 10 of 4 1.20None
Crop10 20 of 4 1.00None
Midgut7 20 of 4 0.70None
Tubule17 12 of 4 1.70Up
Hindgut14 10 of 4 1.40None
Heart9 10 of 4 0.96None
Fat body12 20 of 4 1.24None
Ovary4 10 of 4 0.40Down
Testis23 04 of 4 2.30Up
Male accessory glands10 30 of 4 1.00None
Virgin spermatheca6 20 of 4 0.62None
Mated spermatheca8 20 of 4 0.80None
Adult carcass29 13 of 4 2.80Up
Larval CNS7 20 of 4 0.75None
Larval Salivary gland6 20 of 4 0.64None
Larval midgut6 30 of 4 0.66None
Larval tubule10 20 of 4 1.00None
Larval hindgut9 00 of 4 0.87None
Larval fat body14 20 of 4 1.40None
Larval trachea6 00 of 4 0.64None
Larval carcass6 10 of 4 0.59None
S2 cells (growing)52 34 of 4 5.09Up
Whole fly10 10 of 4



Sno-oncogene (Snoo):

Annotation Number : HDC01368
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085450
Gbrowse : chr2L:7957710-7958669 (-) // 100.0 //
Probeset : 1637449_at
Accessions : protein= NP_001097115; /// NP_001097116; /// NP_001097117; /// NP_001097118; /// NP_001097119;, nucleotide= NM_001103645; /// NM_001103646; /// NM_001103647; /// NM_001103648; /// NM_001103649;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0085450.
TRiP has 1 RNAi stocks for FBgn0085450 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085450 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain10 14 of 4 1.00None
Head9 21 of 4 1.00None
Eye4 00 of 4 0.43Down
Thoracicoabdominal ganglion9 23 of 4 0.90None
Salivary gland26 54 of 4 2.60None
Crop15 14 of 4 1.50None
Midgut15 14 of 4 1.50Up
Tubule9 03 of 4 0.90Down
Hindgut16 04 of 4 1.60Up
Heart8 03 of 4 0.85None
Fat body16 44 of 4 1.60None
Ovary7 14 of 4 0.70None
Testis10 14 of 4 1.00None
Male accessory glands22 34 of 4 2.20Up
Virgin spermatheca10 23 of 4 0.98None
Mated spermatheca14 34 of 4 1.44None
Adult carcass19 13 of 4 1.80Up
Larval CNS7 14 of 4 0.68Down
Larval Salivary gland13 22 of 4 1.32None
Larval midgut14 33 of 4 1.44None
Larval tubule11 03 of 4 1.10None
Larval hindgut11 04 of 4 1.09None
Larval fat body16 34 of 4 1.60None
Larval trachea9 33 of 4 0.92None
Larval carcass13 13 of 4 1.32None
S2 cells (growing)16 14 of 4 1.61Up
Whole fly10 04 of 4



Sno-oncogene (Snoo):

Annotation Number : CG7093
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085450
Gbrowse : chr2L:7893412-7896748 (-) // 100.0 //
Probeset : 1639414_at
Accessions : protein= NP_001097115; /// NP_001097116; /// NP_001097117; /// NP_001097118; /// NP_001097119;, nucleotide= NM_001103645; /// NM_001103646; /// NM_001103647; /// NM_001103648; /// NM_001103649;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005488 // binding // inferred from electronic
FlyMine data for FBgn0085450.
TRiP has 1 RNAi stocks for FBgn0085450 available for purchase.
VDRC has 4 RNAi stocks for FBgn0085450 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain175 64 of 4 6.20Up
Head51 54 of 4 1.80Up
Eye60 54 of 4 2.14Up
Thoracicoabdominal ganglion110 84 of 4 3.90Up
Salivary gland51 164 of 4 1.81None
Crop85 34 of 4 3.00Up
Midgut52 34 of 4 1.90Up
Tubule82 104 of 4 2.90Up
Hindgut68 54 of 4 2.40Up
Heart103 144 of 4 3.64Up
Fat body125 204 of 4 4.43Up
Ovary16 04 of 4 0.60Down
Testis12 14 of 4 0.50Down
Male accessory glands27 44 of 4 1.00None
Virgin spermatheca98 74 of 4 3.47Up
Mated spermatheca82 104 of 4 2.90Up
Adult carcass55 124 of 4 2.00None
Larval CNS198 324 of 4 7.01Up
Larval Salivary gland85 44 of 4 3.00Up
Larval midgut53 54 of 4 1.87Up
Larval tubule67 24 of 4 2.40Up
Larval hindgut70 44 of 4 2.47Up
Larval fat body49 74 of 4 1.70None
Larval trachea91 184 of 4 3.21Up
Larval carcass80 64 of 4 2.85Up
S2 cells (growing)63 24 of 4 2.24Up
Whole fly28 34 of 4

Looking for FBgn0085450. 3 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime