Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0085451 through 18771 annotations produced 2 hits



CG7274 (CG34422):

Annotation Number : CG7282
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085451
Gbrowse : chrX:18743590-18749892 (+) // 100.0 //
Probeset : 1641329_at
Accessions : protein= NP_001097025; /// NP_573330;, nucleotide= NM_001103555; /// NM_133102;
Pathway : engulfment // inferred from mutant phenotype"
Interpro : 0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic ann
FlyMine data for FBgn0085451.
TRiP has 1 RNAi stocks for FBgn0085451 available for purchase.
VDRC has 5 RNAi stocks for FBgn0085451 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain103 54 of 4 2.10Up
Head54 24 of 4 1.10None
Eye58 14 of 4 1.20Up
Thoracicoabdominal ganglion68 14 of 4 1.40Up
Salivary gland175 124 of 4 3.59Up
Crop75 54 of 4 1.60Up
Midgut68 13 of 4 1.40Up
Tubule72 94 of 4 1.50Up
Hindgut71 44 of 4 1.50Up
Heart55 34 of 4 1.14None
Fat body63 44 of 4 1.31Up
Ovary91 44 of 4 1.90Up
Testis19 12 of 4 0.40Down
Male accessory glands103 64 of 4 2.10Up
Virgin spermatheca93 74 of 4 1.92Up
Mated spermatheca91 74 of 4 1.88Up
Adult carcass73 64 of 4 1.50Up
Larval CNS167 104 of 4 3.42Up
Larval Salivary gland190 94 of 4 3.89Up
Larval midgut83 24 of 4 1.72Up
Larval tubule124 34 of 4 2.50Up
Larval hindgut103 64 of 4 2.13Up
Larval fat body107 104 of 4 2.20Up
Larval trachea115 104 of 4 2.36Up
Larval carcass87 24 of 4 1.78Up
S2 cells (growing)166 54 of 4 3.41Up
Whole fly48 14 of 4



CG7274 (CG34422):

Annotation Number : CG7274
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085451
Gbrowse : chrX:18738531-18740400 (+) // 100.0 //
Probeset : 1623880_at
Accessions : protein= NP_001097025; /// NP_573330;, nucleotide= NM_001103555; /// NM_133102;
Pathway : engulfment // inferred from mutant phenotype"
Interpro : 0000785 // chromatin // inferred from electronic annotation /// 0005622 // intracellular // inferred from electronic ann
FlyMine data for FBgn0085451.
BioGrid reports that CG7274 interacts with CG8291 .
TRiP has 1 RNAi stocks for FBgn0085451 available for purchase.
VDRC has 5 RNAi stocks for FBgn0085451 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.90None
Head2 00 of 4 1.30None
Eye2 10 of 4 1.46None
Thoracicoabdominal ganglion1 00 of 4 0.90None
Salivary gland5 20 of 4 3.07None
Crop3 10 of 4 2.10None
Midgut1 00 of 4 0.70None
Tubule2 00 of 4 1.50Up
Hindgut1 00 of 4 0.80None
Heart3 10 of 4 1.84None
Fat body4 40 of 4 2.57None
Ovary0 00 of 4 0.50None
Testis2 10 of 4 1.60None
Male accessory glands5 20 of 4 3.40None
Virgin spermatheca2 00 of 4 1.21None
Mated spermatheca1 00 of 4 0.91None
Adult carcass2 00 of 4 1.20None
Larval CNS1 00 of 4 0.65None
Larval Salivary gland1 00 of 4 0.79None
Larval midgut3 10 of 4 2.06None
Larval tubule2 10 of 4 1.20None
Larval hindgut2 00 of 4 1.40None
Larval fat body3 10 of 4 2.10None
Larval trachea1 10 of 4 0.82None
Larval carcass5 20 of 4 2.97None
S2 cells (growing)1 00 of 4 1.10None
Whole fly1 00 of 4

Looking for FBgn0085451. 2 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime