FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0085478 through 18771 annotations produced 2 hits

(CG34449):

Annotation Number : CG32705
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085478
Gbrowse : chrX:9220690-9233030 (-) // 100.0 //
Probeset : 1626550_at
Accessions : protein= NP_001096921; /// NP_001096922; /// NP_727339;, nucleotide= NM_001103451; /// NM_001103452; /// NM_167189;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from ele
FlyMine data for FBgn0085478.
Homophila reports that CG32705 is a close match (1e-42) to human gene (NP_057116), a gene associated with .
BioGrid reports that CG32705 interacts with CG4463 Dmel CG34168 CG7123 CG7570 CG8942 CG9572 .
VDRC has 5 RNAi stocks for FBgn0085478 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 2	4 of 4	0.50	Down
Head	8 ± 1	0 of 4	0.20	Down
Eye	7 ± 0	1 of 4	0.14	Down
Thoracicoabdominal ganglion	12 ± 1	1 of 4	0.30	Down
Salivary gland	12 ± 4	0 of 4	0.25	Down
Crop	28 ± 2	2 of 4	0.60	Down
Midgut	15 ± 1	1 of 4	0.30	Down
Tubule	14 ± 1	1 of 4	0.30	Down
Hindgut	15 ± 1	1 of 4	0.30	Down
Heart	19 ± 1	4 of 4	0.40	Down
Fat body	21 ± 4	1 of 4	0.43	Down
Ovary	275 ± 14	4 of 4	5.50	Up
Testis	35 ± 4	4 of 4	0.70	Down
Male accessory glands	9 ± 3	0 of 4	0.20	Down
Virgin spermatheca	23 ± 1	1 of 4	0.47	Down
Mated spermatheca	27 ± 0	4 of 4	0.54	Down
Adult carcass	15 ± 2	0 of 4	0.30	Down
Larval CNS	40 ± 7	4 of 4	0.80	None
Larval Salivary gland	35 ± 1	4 of 4	0.70	Down
Larval midgut	28 ± 0	2 of 4	0.57	Down
Larval tubule	22 ± 2	0 of 4	0.40	Down
Larval hindgut	29 ± 0	4 of 4	0.58	Down
Larval fat body	26 ± 2	1 of 4	0.50	Down
Larval trachea	25 ± 7	1 of 4	0.51	Down
Larval carcass	31 ± 3	4 of 4	0.62	Down
S2 cells (growing)	49 ± 4	4 of 4	0.99	None
Whole fly	50 ± 3	4 of 4

(CG34449):

Annotation Number : CT35401
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0085478
Gbrowse : chrX:9220937-9221267 (-) // 100.0 //
Probeset : 1640048_s_at
Accessions : protein= NP_001096921; /// NP_001096922; /// NP_727339;, nucleotide= NM_001103451; /// NM_001103452; /// NM_167189;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from ele
FlyMine data for FBgn0085478.
VDRC has 5 RNAi stocks for FBgn0085478 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	29 ± 3	3 of 4	0.70	None
Head	5 ± 2	0 of 4	0.10	Down
Eye	5 ± 1	0 of 4	0.12	Down
Thoracicoabdominal ganglion	11 ± 3	0 of 4	0.30	Down
Salivary gland	9 ± 1	0 of 4	0.22	Down
Crop	17 ± 1	0 of 4	0.40	Down
Midgut	10 ± 5	0 of 4	0.20	Down
Tubule	19 ± 3	0 of 4	0.50	Down
Hindgut	10 ± 5	0 of 4	0.20	Down
Heart	7 ± 3	0 of 4	0.18	Down
Fat body	12 ± 8	0 of 4	0.28	Down
Ovary	102 ± 3	4 of 4	2.40	Up
Testis	33 ± 2	2 of 4	0.80	None
Male accessory glands	9 ± 3	0 of 4	0.20	Down
Virgin spermatheca	10 ± 3	0 of 4	0.25	Down
Mated spermatheca	8 ± 3	0 of 4	0.19	Down
Adult carcass	8 ± 1	0 of 4	0.20	Down
Larval CNS	23 ± 3	2 of 4	0.55	None
Larval Salivary gland	17 ± 5	0 of 4	0.40	Down
Larval midgut	11 ± 5	0 of 4	0.27	Down
Larval tubule	8 ± 2	0 of 4	0.20	Down
Larval hindgut	22 ± 3	0 of 4	0.52	None
Larval fat body	8 ± 3	0 of 4	0.20	Down
Larval trachea	19 ± 3	0 of 4	0.45	None
Larval carcass	31 ± 5	0 of 4	0.73	None
S2 cells (growing)	53 ± 2	3 of 4	1.23	None
Whole fly	43 ± 8	0 of 4

Looking for FBgn0085478. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720