Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0086134 through 18771 annotations produced 1 hits



20s proteasome (Pros25):

Annotation Number : CG5266
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086134
Gbrowse : chr3R:8257046-8258279 (+) // 100.0 //
Probeset : 1635872_at
Accessions : protein= NP_524328;, nucleotide= NM_079604;
Pathway : "0000502 // proteasome complex // non-traceable author statement /// 0000502 // proteasome complex // inferred from elec
Interpro : alpha-subunit complex // inferred from electronic annotation"
FlyMine data for FBgn0086134.
Homophila reports that CG5266 is a close match (2e-29) to human gene P27K;PROS27;PSMA6 (NP_002782), a gene associated with {Myocardial infarcation, susceptibility to} (3).
BioGrid reports that CG5266 interacts with CG7111 .
TRiP has 1 RNAi stocks for FBgn0086134 available for purchase.
VDRC has 2 RNAi stocks for FBgn0086134 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain354 ± 64 of 4 0.40Down
Head574 ± 174 of 4 0.60Down
Eye537 ± 64 of 4 0.57Down
Thoracicoabdominal ganglion424 ± 134 of 4 0.40Down
Salivary gland529 ± 94 of 4 0.56Down
Crop954 ± 194 of 4 1.00None
Midgut774 ± 264 of 4 0.80Down
Tubule521 ± 214 of 4 0.50Down
Hindgut648 ± 84 of 4 0.70Down
Heart1729 ± 624 of 4 1.82Up
Fat body1604 ± 434 of 4 1.69Up
Ovary1324 ± 244 of 4 1.40Up
Testis864 ± 174 of 4 0.90Down
Male accessory glands1003 ± 294 of 4 1.10None
Virgin spermatheca639 ± 144 of 4 0.67Down
Mated spermatheca615 ± 174 of 4 0.65Down
Adult carcass1255 ± 354 of 4 1.30Up
Larval CNS1106 ± 454 of 4 1.16Up
Larval Salivary gland1467 ± 604 of 4 1.54Up
Larval midgut1152 ± 1014 of 4 1.21None
Larval tubule1977 ± 234 of 4 2.10Up
Larval hindgut1195 ± 664 of 4 1.26Up
Larval fat body923 ± 584 of 4 1.00None
Larval trachea1257 ± 954 of 4 1.32Up
Larval carcass1776 ± 1514 of 4 1.87Up
S2 cells (growing)1045 ± 184 of 4 1.10Up
Whole fly951 ± 174 of 4

Looking for FBgn0086134. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime