FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0086254 through 18771 annotations produced 2 hits

ESTS:34F4T (CG6084):

Annotation Number : CG6084
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086254
Gbrowse : chr3L:11613634-11616785 (-) // 100.0 //
Probeset : 1631205_a_at
Accessions : protein= NP_648484; /// NP_729726;, nucleotide= NM_140227; /// NM_168467;
Interpro : 0004032 // aldehyde reductase activity // inferred from sequence or structural similarity /// 0004032 // aldehyde reduct
FlyMine data for FBgn0086254.
Homophila reports that CG6084 is a close match (5e-77) to human gene (NP_005980), a gene associated with .
BioGrid reports that CG6084 interacts with CG6843 CG6998 CG8614 CG8815 CG9871 .
VDRC has 2 RNAi stocks for FBgn0086254 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	579 ± 10	4 of 4	0.40	Down
Head	1545 ± 63	4 of 4	1.20	Up
Eye	1189 ± 123	4 of 4	0.90	None
Thoracicoabdominal ganglion	826 ± 18	4 of 4	0.60	Down
Salivary gland	1757 ± 49	4 of 4	1.33	Up
Crop	1462 ± 58	4 of 4	1.10	None
Midgut	2546 ± 22	4 of 4	1.90	Up
Tubule	6287 ± 254	4 of 4	4.80	Up
Hindgut	3617 ± 37	4 of 4	2.70	Up
Heart	2276 ± 108	4 of 4	1.72	Up
Fat body	2376 ± 460	4 of 4	1.80	Up
Ovary	1618 ± 18	4 of 4	1.20	Up
Testis	863 ± 22	4 of 4	0.70	Down
Male accessory glands	1040 ± 40	4 of 4	0.80	Down
Virgin spermatheca	2815 ± 263	4 of 4	2.13	Up
Mated spermatheca	1657 ± 227	4 of 4	1.25	None
Adult carcass	1934 ± 53	4 of 4	1.50	Up
Larval CNS	1020 ± 123	4 of 4	0.77	Down
Larval Salivary gland	183 ± 23	4 of 4	0.14	Down
Larval midgut	1230 ± 151	4 of 4	0.93	None
Larval tubule	1163 ± 70	4 of 4	0.90	None
Larval hindgut	1030 ± 82	4 of 4	0.78	Down
Larval fat body	285 ± 38	4 of 4	0.20	Down
Larval trachea	539 ± 33	4 of 4	0.41	Down
Larval carcass	1139 ± 92	4 of 4	0.86	None
S2 cells (growing)	2729 ± 73	4 of 4	2.07	Up
Whole fly	1321 ± 32	4 of 4

ESTS:34F4T (CG6084):

Annotation Number : CG6084
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086254
Gbrowse : chr3L:11613632-11617481 (-) // 100.0 //
Probeset : 1629705_at
Accessions : protein= NP_648484; /// NP_729726;, nucleotide= NM_140227; /// NM_168467;
Interpro : 0004032 // aldehyde reductase activity // inferred from sequence or structural similarity /// 0004032 // aldehyde reduct
FlyMine data for FBgn0086254.
Homophila reports that CG6084 is a close match (5e-77) to human gene (NP_005980), a gene associated with .
BioGrid reports that CG6084 interacts with CG6843 CG6998 CG8614 CG8815 CG9871 .
VDRC has 2 RNAi stocks for FBgn0086254 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	256 ± 10	4 of 4	0.30	Down
Head	270 ± 17	4 of 4	0.30	Down
Eye	747 ± 26	4 of 4	0.93	None
Thoracicoabdominal ganglion	311 ± 21	4 of 4	0.40	Down
Salivary gland	233 ± 18	4 of 4	0.29	Down
Crop	448 ± 16	4 of 4	0.60	Down
Midgut	99 ± 5	4 of 4	0.10	Down
Tubule	310 ± 7	4 of 4	0.40	Down
Hindgut	3546 ± 90	4 of 4	4.40	Up
Heart	376 ± 47	4 of 4	0.47	Down
Fat body	53 ± 11	4 of 4	0.07	Down
Ovary	1344 ± 49	4 of 4	1.70	Up
Testis	911 ± 19	4 of 4	1.10	None
Male accessory glands	586 ± 15	4 of 4	0.70	Down
Virgin spermatheca	185 ± 15	4 of 4	0.23	Down
Mated spermatheca	138 ± 21	4 of 4	0.17	Down
Adult carcass	169 ± 22	4 of 4	0.20	Down
Larval CNS	698 ± 58	4 of 4	0.87	None
Larval Salivary gland	39 ± 2	4 of 4	0.05	Down
Larval midgut	111 ± 11	4 of 4	0.14	Down
Larval tubule	25 ± 5	4 of 4	0.00	Down
Larval hindgut	633 ± 44	4 of 4	0.79	Down
Larval fat body	96 ± 38	4 of 4	0.10	Down
Larval trachea	188 ± 26	4 of 4	0.23	Down
Larval carcass	602 ± 80	4 of 4	0.75	None
S2 cells (growing)	2299 ± 101	4 of 4	2.86	Up
Whole fly	804 ± 36	4 of 4

Looking for FBgn0086254. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720