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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0086367 through 18771 annotations produced 1 hits



CG12120 (t):

Annotation Number : CG12120
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086367
Gbrowse : chrX:9111687-9117290 (-) // 100.0 //
Probeset : 1638505_at
Accessions : protein= NP_572543;, nucleotide= NM_132315;
Pathway : 0005829 // cytosol // inferred from direct assay
Interpro : 0003832 // beta-alanyl-dopamine hydrolase activity // inferred from direct assay /// 0003832 // beta-alanyl-dopamine hyd
FlyMine data for FBgn0086367.
VDRC has 1 RNAi stocks for FBgn0086367 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain55 84 of 4 0.30Down
Head1206 564 of 4 6.10Up
Eye2063 1714 of 410.37Up
Thoracicoabdominal ganglion8 02 of 4 0.00Down
Salivary gland58 34 of 4 0.30Down
Crop17 23 of 4 0.10Down
Midgut129 94 of 4 0.70Down
Tubule1003 644 of 4 5.00Up
Hindgut323 164 of 4 1.60Up
Heart13 14 of 4 0.07Down
Fat body31 134 of 4 0.16Down
Ovary3 10 of 4 0.00Down
Testis45 44 of 4 0.20Down
Male accessory glands42 34 of 4 0.20Down
Virgin spermatheca20 14 of 4 0.11Down
Mated spermatheca33 44 of 4 0.17Down
Adult carcass164 184 of 4 0.80None
Larval CNS8 34 of 4 0.04Down
Larval Salivary gland12 22 of 4 0.06Down
Larval midgut95 44 of 4 0.48Down
Larval tubule702 174 of 4 3.50Up
Larval hindgut150 124 of 4 0.76Down
Larval fat body157 144 of 4 0.80None
Larval trachea114 964 of 4 0.58None
Larval carcass13 24 of 4 0.07Down
S2 cells (growing)3 00 of 4 0.02Down
Whole fly199 74 of 4

Looking for FBgn0086367. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime