Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0086370 through 18771 annotations produced 1 hits



sarah (sra):

Annotation Number : CG6072
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086370
Gbrowse : chr3R:12012655-12023310 (+) // 99.74 //
Probeset : 1639162_at
Accessions : protein= NP_524378;, nucleotide= NM_079654;
Pathway : post-mating // inferred from mutant phenotype /// 0048477 // oogenesis // inferred from electronic annotation"
FlyMine data for FBgn0086370.
TRiP has 2 RNAi stocks for FBgn0086370 available for purchase.
VDRC has 2 RNAi stocks for FBgn0086370 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain643 ± 184 of 4 2.80Up
Head356 ± 184 of 4 1.60Up
Eye284 ± 174 of 4 1.24Up
Thoracicoabdominal ganglion619 ± 244 of 4 2.70Up
Salivary gland298 ± 84 of 4 1.30Up
Crop271 ± 74 of 4 1.20Up
Midgut188 ± 44 of 4 0.80Down
Tubule209 ± 74 of 4 0.90Down
Hindgut315 ± 44 of 4 1.40Up
Heart574 ± 254 of 4 2.51Up
Fat body194 ± 114 of 4 0.85Down
Ovary351 ± 114 of 4 1.50Up
Testis230 ± 64 of 4 1.00None
Male accessory glands186 ± 44 of 4 0.80Down
Virgin spermatheca192 ± 124 of 4 0.84None
Mated spermatheca206 ± 124 of 4 0.90None
Adult carcass300 ± 244 of 4 1.30None
Larval CNS301 ± 74 of 4 1.32Up
Larval Salivary gland113 ± 94 of 4 0.50Down
Larval midgut281 ± 244 of 4 1.23None
Larval tubule154 ± 44 of 4 0.70Down
Larval hindgut218 ± 74 of 4 0.96None
Larval fat body92 ± 34 of 4 0.40Down
Larval trachea181 ± 64 of 4 0.79Down
Larval carcass176 ± 144 of 4 0.77Down
S2 cells (growing)345 ± 74 of 4 1.51Up
Whole fly228 ± 84 of 4

Looking for FBgn0086370. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime